Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3827 |
Symbol | |
ID | 3905575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4588437 |
End bp | 4588955 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637881153 |
Product | MarR family transcriptional regulator |
Protein accession | YP_482906 |
Protein GI | 86742506 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.360185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0550359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCG AAGAGATGTT CGGCGCCAGC TCCGAGACCG GCGAGGACTG GGTCGACGAA CATGGGATGT GGGCCTGGCG TGAGCTGCTG CACGCCCATG CCCACGTGAC CCGGGTCCTC GAGGCCGAGC TCGAGGCGGC TCACCGGCTT CCCCTGGCCT CGTACGACGT GCTGGTCCAG CTCGCCGAGG CCCCGAACGG CGAGTTACGG ATGAGCGAAC TCGCCCAGGC GGTGCTGCTC TCCCGCAGCG GTCTCACCCG GTTGGTCGAC CGGCTGGAAC GGGAGGGACT GGTCGCCCGG CGGTCCTGCC CGTCGGATGC CCGCGGCACG CTCGCCACCC TCACCCCGCA GGGATTCGAC CGCTTGCGGG CGGCCTCGGG CACCCACCTC AAGGGGGTCG CCCGGCACGT GCTCTCCCAC TTCAGCCGAA CCGAGCAGGA CCTGCTCGCC GAGCTGCTGG GCCGGCTGAG CCCGCCGAGG CCGGGCGGCA ACGGCCGGGG GTACGACGCG AACGCCTGA
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Protein sequence | MAVEEMFGAS SETGEDWVDE HGMWAWRELL HAHAHVTRVL EAELEAAHRL PLASYDVLVQ LAEAPNGELR MSELAQAVLL SRSGLTRLVD RLEREGLVAR RSCPSDARGT LATLTPQGFD RLRAASGTHL KGVARHVLSH FSRTEQDLLA ELLGRLSPPR PGGNGRGYDA NA
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