Gene Francci3_3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3827 
Symbol 
ID3905575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4588437 
End bp4588955 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content72% 
IMG OID637881153 
ProductMarR family transcriptional regulator 
Protein accessionYP_482906 
Protein GI86742506 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.360185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0550359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCG AAGAGATGTT CGGCGCCAGC TCCGAGACCG GCGAGGACTG GGTCGACGAA 
CATGGGATGT GGGCCTGGCG TGAGCTGCTG CACGCCCATG CCCACGTGAC CCGGGTCCTC
GAGGCCGAGC TCGAGGCGGC TCACCGGCTT CCCCTGGCCT CGTACGACGT GCTGGTCCAG
CTCGCCGAGG CCCCGAACGG CGAGTTACGG ATGAGCGAAC TCGCCCAGGC GGTGCTGCTC
TCCCGCAGCG GTCTCACCCG GTTGGTCGAC CGGCTGGAAC GGGAGGGACT GGTCGCCCGG
CGGTCCTGCC CGTCGGATGC CCGCGGCACG CTCGCCACCC TCACCCCGCA GGGATTCGAC
CGCTTGCGGG CGGCCTCGGG CACCCACCTC AAGGGGGTCG CCCGGCACGT GCTCTCCCAC
TTCAGCCGAA CCGAGCAGGA CCTGCTCGCC GAGCTGCTGG GCCGGCTGAG CCCGCCGAGG
CCGGGCGGCA ACGGCCGGGG GTACGACGCG AACGCCTGA
 
Protein sequence
MAVEEMFGAS SETGEDWVDE HGMWAWRELL HAHAHVTRVL EAELEAAHRL PLASYDVLVQ 
LAEAPNGELR MSELAQAVLL SRSGLTRLVD RLEREGLVAR RSCPSDARGT LATLTPQGFD
RLRAASGTHL KGVARHVLSH FSRTEQDLLA ELLGRLSPPR PGGNGRGYDA NA