Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3826 |
Symbol | |
ID | 3905574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4587509 |
End bp | 4588378 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637881152 |
Product | PHP-like |
Protein accession | YP_482905 |
Protein GI | 86742505 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.596413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.059434 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGGG TGGCCATCGA CCTGCACACC CATTCGACCG CCTCGGACGG CCTGGAGTCA CCGGAGAACC TCGTCCGGCT CGCAGCCGGG CAGGGCCTGT CGATCCTCGC GCTCACCGAC CATGACACCA TCGCGGGCAT CGGCCGCGCG GCCGCGGCCC TGCCTGCCGG GCTGACCCTG GTGCCGGGCG CCGAGATCTC CTGCCAGGTC GAGGTGGCAG GTGCGTGGGT ATCCCTGCAC GTGCTGGCCT ACCTGTTCGA CCCGGCCGAG CCGGCGTTCG CGGCGGCCCG GGCCCGGGTG CGGGAACATC GCGCCACCCG GGCCCGTCGG ATGGTCGACC GACTCGCCGC GGACGGGCAT CCGGTGCGCT GGGAACGGGT CCTGGAGCTG GCGGCCGGCA CGGTGGGCCG CCCCCACATC GCCGCGGTCA TGGTCGAGGC CGGGCTGATC CCCGAGGTGG CGGCCGCGTT CAGCAACCGG TGGATCGGCG CGGGCGGACC GTACTGGGTG GGCAAGGAGC AGCCGGACGT CTGGGAGGCG CTTCGCCTCA TCCACGGCGC CGGCGGGGTG AGCGTGTTCG CGCACCCGTT CGCGAGCAGG CGCGGCGTCA CAGTCGGTCC CGAGGTGATC GAGGCGATGG CGAAGGCGGG CCTGACCGGC CTCGAGGTCG ATCATCCCGA TCACCTACCC GTCGCGCGGC GCCGGCTACG TGGCCTCGCT GCCGAGCTCT CGCTGGTGGC GACCGGTTCC AGTGACTTCC ACGGCGCCAG CAAGCCCCAG GGGCTCGGGG CCGAGACCAC CTCCCGGGAG GCGTACGAGG CGTTGATCTC CACCGCGCGG GGGGCGGTCC CGATCACCGC GTCCGGATGA
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Protein sequence | MERVAIDLHT HSTASDGLES PENLVRLAAG QGLSILALTD HDTIAGIGRA AAALPAGLTL VPGAEISCQV EVAGAWVSLH VLAYLFDPAE PAFAAARARV REHRATRARR MVDRLAADGH PVRWERVLEL AAGTVGRPHI AAVMVEAGLI PEVAAAFSNR WIGAGGPYWV GKEQPDVWEA LRLIHGAGGV SVFAHPFASR RGVTVGPEVI EAMAKAGLTG LEVDHPDHLP VARRRLRGLA AELSLVATGS SDFHGASKPQ GLGAETTSRE AYEALISTAR GAVPITASG
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