Gene Francci3_3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3819 
Symbol 
ID3905567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4577759 
End bp4578337 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content74% 
IMG OID637881145 
Producthypothetical protein 
Protein accessionYP_482898 
Protein GI86742498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0484184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.318501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACA GCGCGATCCT GCGATCGGTC GAGGAGCATG CGGCGGCGCT CTTCGGACCG 
GACACCGGTC GGGCCGCGGT CACGTTCCTC GGCACCGACC AGATCGAGGT GCTGCGGTTC
GGCCCGGACC AGGCGGGCGT CATCCGCTAT CTCACCCTGG GTATGTCCCG GGAGCCGATG
ACGGCGGCGA CGACGACCGT GCGCGACCCC GCCGGCCCGC GGGCCGAACT CGTGCTGTCC
CTGCGCGGGC GGCGCGACAG CGTGCTGCGG CGGTTGGCCG TGCTGGCCGC CGTCCCGACG
GTCGAGGGCC GTCCGGTGGC TCCCGGGTCC GGCCTGGATC TCGGGGAACC GCTCTGGGAC
GGCGCACCGT TCACCGCGGT GCTCGTCGGC GAGCCCGGCG GGCTCATCCC CGATCTCGCC
ACCGGGCTCG CACCTGTCCG CTTTCTCCCC CTGCTTCCGA TGACCCCCAA CGAGTCCGCC
TACAAGCGGG TGCACGGCCC GGACGCGCTG CACCAGCGGT GGCTGGCGGC CGGGACGGAT
CTGCGCGACC CCGGCCGCCG GGAGGTCCAT CTCGGCTGA
 
Protein sequence
MSDSAILRSV EEHAAALFGP DTGRAAVTFL GTDQIEVLRF GPDQAGVIRY LTLGMSREPM 
TAATTTVRDP AGPRAELVLS LRGRRDSVLR RLAVLAAVPT VEGRPVAPGS GLDLGEPLWD
GAPFTAVLVG EPGGLIPDLA TGLAPVRFLP LLPMTPNESA YKRVHGPDAL HQRWLAAGTD
LRDPGRREVH LG