Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3819 |
Symbol | |
ID | 3905567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4577759 |
End bp | 4578337 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637881145 |
Product | hypothetical protein |
Protein accession | YP_482898 |
Protein GI | 86742498 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0484184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.318501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGACA GCGCGATCCT GCGATCGGTC GAGGAGCATG CGGCGGCGCT CTTCGGACCG GACACCGGTC GGGCCGCGGT CACGTTCCTC GGCACCGACC AGATCGAGGT GCTGCGGTTC GGCCCGGACC AGGCGGGCGT CATCCGCTAT CTCACCCTGG GTATGTCCCG GGAGCCGATG ACGGCGGCGA CGACGACCGT GCGCGACCCC GCCGGCCCGC GGGCCGAACT CGTGCTGTCC CTGCGCGGGC GGCGCGACAG CGTGCTGCGG CGGTTGGCCG TGCTGGCCGC CGTCCCGACG GTCGAGGGCC GTCCGGTGGC TCCCGGGTCC GGCCTGGATC TCGGGGAACC GCTCTGGGAC GGCGCACCGT TCACCGCGGT GCTCGTCGGC GAGCCCGGCG GGCTCATCCC CGATCTCGCC ACCGGGCTCG CACCTGTCCG CTTTCTCCCC CTGCTTCCGA TGACCCCCAA CGAGTCCGCC TACAAGCGGG TGCACGGCCC GGACGCGCTG CACCAGCGGT GGCTGGCGGC CGGGACGGAT CTGCGCGACC CCGGCCGCCG GGAGGTCCAT CTCGGCTGA
|
Protein sequence | MSDSAILRSV EEHAAALFGP DTGRAAVTFL GTDQIEVLRF GPDQAGVIRY LTLGMSREPM TAATTTVRDP AGPRAELVLS LRGRRDSVLR RLAVLAAVPT VEGRPVAPGS GLDLGEPLWD GAPFTAVLVG EPGGLIPDLA TGLAPVRFLP LLPMTPNESA YKRVHGPDAL HQRWLAAGTD LRDPGRREVH LG
|
| |