Gene Francci3_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3816 
Symbol 
ID3905564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4574019 
End bp4574630 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID637881142 
Producthypothetical protein 
Protein accessionYP_482895 
Protein GI86742495 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.313725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.183885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGTC TGGGAGGTCT GGGAGGTCTG GGACGTCTGG GAGGTCTGGG AGGTCTGGGA 
CGCCGCCGGC CGCGAGGCGC CCGCCTCGAT CAGCCGCGGC TGTCCCGGCG GTCCGCCCTG
CGCTCCGCCT ACGAGCCGGA CGCCTTCGGG CGGATCGCGG AGCGGGTGGC GCGTTTCATC
GGCACGGCCC GGTACCTCGT TGCGCAGAGC GTCGTGATTG TGCTGTGGGT CGCTTACAAC
ATCATCGCCC CGCAGTCCGT CCGGTTCGAC AATTTCCCGT TCATCTTTCT GACGTTGGTC
CTGTCGCTGC AGGCCGCGTA CGCGGCACCG CTCATCCTGT TGGCGCAGAA CCGCCAGGAT
GACCGGGACC GCGCGAACCT CGCCCAGGAC CGCGAGCAGA CCATCCGTAA CCGCGAGGAC
ACCGAATACC TCGCCCGCGA ACTGGCCGCG ATGCGCATCA CGATCGGCGA GCTCGCCACC
CGGGACTTTC TGCGTTCGGA GCTGCGGGGG TTGCTCGCGG AGCTGGAGGG GCCGGACGGT
GACCGGGCGA AGGACCGCGA CCGGGAACGC CGACGGCGGC GGGGGGGCGA GCGTTCGTTA
CGTCCGCCGT GA
 
Protein sequence
MRRLGGLGGL GRLGGLGGLG RRRPRGARLD QPRLSRRSAL RSAYEPDAFG RIAERVARFI 
GTARYLVAQS VVIVLWVAYN IIAPQSVRFD NFPFIFLTLV LSLQAAYAAP LILLAQNRQD
DRDRANLAQD REQTIRNRED TEYLARELAA MRITIGELAT RDFLRSELRG LLAELEGPDG
DRAKDRDRER RRRRGGERSL RPP