| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3809 |
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| Symbol | |
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| ID | 3905557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4566464 |
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| End bp | 4568413 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637881135 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_482888 |
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| Protein GI | 86742488 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.130283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.862178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCTC GGCCGCCGTG TAGCAGGCGT CGCCTCGTCA CCTGTGCACC CAGAGTTGCC
ATCGAGGGCA CCGGGGCACA TGGATTTTCG GGTCGCGGGC GCCGCGCGGC TCACCGCGAG
CGGGTTCAGC GTAGACACCG CTCAGAGAAG ACCAGGAGCG TCCCGCTGTC CGTCACAGCT
GAAGTACCCA CAGATGATCT GACTCCCTAC GAGCCACAAA CCACCCCCTC CACCCCCGGG
TCCCCGGCGG CACCGACCTT CGCGGAGCTC GGCGTGCGCG CCGAGACCGT CTCGGCCCTG
ACCGAAGCGG GCATCGTGCA CGCTTTCCCC ATCCAGGAGT TGACGCTTCC ACTCGCCCTG
GCCCGCAACG ACATCATCGG GCAGGCCCGC ACCGGCACCG GCAAGACCCT CGCGTTCGGC
GTCCCGGTGG TGCAGACGGT GCTGGCGGCC AAGGAGGGTG CCGACGGCCG TCCGCAGGCC
CTCGTCGTGG TGCCCACCCG TGAGCTGTGC GTCCAGGTGA CCGCGGACGT CACCCGCGCC
GGCGCCCGCC GTGGCCTGCG GGTGCTGTCC GTCTACGGCG GGCGTGCCTA CGAGCCGCAG
CTGTCCGCGC TGCGCGCCGG GGTCGACATC GTCGTCGGCA CGCCCGGCCG CCTGCTGGAT
CTCGCCCGCC AGCACGTGCT CGACCTGGCC GGCGTCGGCA CCCTGGTGCT CGACGAGGCC
GACGAGATGC TCGACCTCGG CTTCCTGCCG GACGTCGAGC GCATCATGTC GCAGCTGCCG
ACCGAGCGGC AGACGATGCT GTTCTCCGCG ACCATGCCCG GCCCGGTCAT CTCCCTGGCC
CGGCGGTTCA TGAAACGGCC CGTGCACGTC CGCGCGGAAC AGCCGGATGA GGGGCGCACG
GTCCCGACCA CCCGTCAGCA CGTCTTCCGC GCCCACGCGC TGGACAAGAT GGAGGTGCTG
GCCCGGGTCC TGCAGGCCGG CGGCCGGGGG CTCGCCATGG TGTTCGTGCG GACCAGGCGC
ACCGCGGACA AGGTCGCCGA GGACCTCGCC AAGCGCGGCT TCGCGGCCGC GGCGGTGCAC
GGCGACCTGG GCCAGGGCCA GCGCGAGCAG GCGCTGCGCG CCTTCCGCTC CGGCAAGGTC
GACGTCCTGG TCGCCACCGA CGTGGCCGCC CGGGGCATCG ACATCAACGG TGTCACCCAC
GTGGTCAACT ACCAGTGCCC CGAAGACGAG AACGTCTATC TGCACCGCAT CGGCCGCACC
GGTCGGGCGG GCGAGAGCGG GGTGGCCATC ACCTTCGTCG ACTGGGACGA CCTGCCGCGG
TGGACGCTCG TCAACAAGGC GCTCGCCCTG CCGTTCGATG GCCCGGTGGA AACCTATTCC
ACCTCCCCCC ACCTGTACGA GGCGCTCGGC ATCCCGGCGG GCGCGAAGGG CACCCTGCCG
CACGCGGCGC GGACCCGCGC CGGGCTCGCG GCCGAGGACA TCGAGGATCT CGGGCAGTCC
GGTCGCGGCG GGCGCCGCGG CTCGCGGACC GGGCGTGACC AGGACCGTTC CGAGCCGGCG
GCGGTGCCGA CCCGGACTCG CGCCCGTCGG CGCACCCGCG GCGGTGGTGC GGCGGCCGCG
GGTGCGGGGC TGGCCATCGC CGCGGACCCG GCGGACCCGG CGGACCCGGT CGACGAGGAC
GGCCGGAAGG CCGGCGCACC CGTGGTGGAC GGTGCCGGGC AGACCGGGCT GGTCGAGTTC
ACCGGGACCG CCCCGCTCAC CGACACGGAC ACCGACACCG CCCGCGTCGT CTCCGCCCTG
GCCTCGGAGA CGGGCGTCGA GGCCGAGGAG TCGCCGCGCC GCCGGCGCCG GCGGCGCGGC
AACCGTGGCC GCGGCACGGG CACGATGCGG GAGGCCGGCG ACGGCACCGA GGCCGACGCC
GACGCGCCAC CCCGAGCCGA GTCGGCCTGA
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| Protein sequence | MSPRPPCSRR RLVTCAPRVA IEGTGAHGFS GRGRRAAHRE RVQRRHRSEK TRSVPLSVTA
EVPTDDLTPY EPQTTPSTPG SPAAPTFAEL GVRAETVSAL TEAGIVHAFP IQELTLPLAL
ARNDIIGQAR TGTGKTLAFG VPVVQTVLAA KEGADGRPQA LVVVPTRELC VQVTADVTRA
GARRGLRVLS VYGGRAYEPQ LSALRAGVDI VVGTPGRLLD LARQHVLDLA GVGTLVLDEA
DEMLDLGFLP DVERIMSQLP TERQTMLFSA TMPGPVISLA RRFMKRPVHV RAEQPDEGRT
VPTTRQHVFR AHALDKMEVL ARVLQAGGRG LAMVFVRTRR TADKVAEDLA KRGFAAAAVH
GDLGQGQREQ ALRAFRSGKV DVLVATDVAA RGIDINGVTH VVNYQCPEDE NVYLHRIGRT
GRAGESGVAI TFVDWDDLPR WTLVNKALAL PFDGPVETYS TSPHLYEALG IPAGAKGTLP
HAARTRAGLA AEDIEDLGQS GRGGRRGSRT GRDQDRSEPA AVPTRTRARR RTRGGGAAAA
GAGLAIAADP ADPADPVDED GRKAGAPVVD GAGQTGLVEF TGTAPLTDTD TDTARVVSAL
ASETGVEAEE SPRRRRRRRG NRGRGTGTMR EAGDGTEADA DAPPRAESA
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