Gene Francci3_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3769 
Symbol 
ID3906053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4517770 
End bp4518555 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content73% 
IMG OID637881095 
Producthydrolase of the alpha/beta-hydrolase fold-like 
Protein accessionYP_482849 
Protein GI86742449 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.200411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGTA AGTCACACAC TCAAGGCGGA AGTCTGACAG ATTCCAGGCT CGACCACGCC 
GTGTCCTTCC CTGTTCGCGC GGATAGATGC GCACCGGATT CGCCGTCCAC CGCCGCCGAC
CCCGGGCAGG TCCCGGGTGA TGGAGCGCCC ACAGCTGTGG ACGGCGGACG GCTGCTGGTG
GTTCCCGGCA CGGCGGAGTC GACGGTGCTC TTCCTGCACG GAGCCGGGAC TGGCACGGAC
ACGCCGCTTT TCGTCCAACT TGCGGCATAT CTCACCTCTG TCGGGGTGCA GGTGGCGCGG
CTGGAGATGC CGTACCGCGT CGCCGGGCGG CGGGCGCCGG ACCGGCCGGC CCGGCTCGAC
GCGGTCGCGA TCGCCGCGGT CGAGGCGCTG GGCCCGCCGC GCCCGTTGGC CTTCGCCGGC
GCCTCGATGG GATCGCGGGT GGCTATGCGG GTCGCGGCCG GGCTCGAGGC GTGCGGCGTG
CTCGCCCTCG GCTTCCCGCT CCAGCCACCG GGAACCACGC CGGCAGGCAA AACCAGGCCG
TCGCGGCAGG ACGAACTCGA CGGCGCGGGC GTCCCGGTGC TCGTCGTCCA GGGTGAGCGG
GACTCCTTCG GGCGACCGCG GCCCGATCCG GAACTCGGCC GCGAGATCCA TCTCGTCGCG
GGAGCCGACC ACTCCTTCCA GACCCGCCGA CGGGATGCGC GTCCGCCCGG CGAGGGCGTG
GCCGAAGCGG CCCGGGTCGG CGCATTCTGG CTGCGGGGCC GGCTGCGGGA ATCATCCGCG
GGCTGA
 
Protein sequence
MRGKSHTQGG SLTDSRLDHA VSFPVRADRC APDSPSTAAD PGQVPGDGAP TAVDGGRLLV 
VPGTAESTVL FLHGAGTGTD TPLFVQLAAY LTSVGVQVAR LEMPYRVAGR RAPDRPARLD
AVAIAAVEAL GPPRPLAFAG ASMGSRVAMR VAAGLEACGV LALGFPLQPP GTTPAGKTRP
SRQDELDGAG VPVLVVQGER DSFGRPRPDP ELGREIHLVA GADHSFQTRR RDARPPGEGV
AEAARVGAFW LRGRLRESSA G