| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3768 |
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| Symbol | |
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| ID | 3906052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4516898 |
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| End bp | 4517707 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637881094 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_482848 |
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| Protein GI | 86742448 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.19863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCTG GGAGCAGCAC CGGCCGGCGG CGGTCCGCGC AGGCGCGGAC CGCCGCCGGC
CGGCCTTTGC CGAGCGTTGC GCCGATGCGC GCTCCGGCTT TGGCCGGGGT ATCGTCCGCT
CTGGAAGGAC GGTCGCGTGT CGCCCGGTCA GGTGTGGTGG ACGCGGGGTG GGCCGCCGGG
GAGCATGACG GTGAGGAAGT GATCCTGGTC GACGAGACCA CCGAGGAGCG AGGCGCCCGT
TTCGAGCAGG ACGCCCTTCC CTACCTCGAC CAGCTGTATG CGGCAGCCCT GCGCATGACC
CGTAATCCCG CCGACGCGGA GGATCTCGTG CAGGAGACCT TCGTCAAGGC GTTCGCGGCC
TTCCACCAGT TTCAGGCGGG CACGAATCTC AAGGCCTGGC TCTACCGGAT TCTGACGAAC
ACGTTCATCA ACACGTACCG CAAGCGGCAG CGCCAGCCGT TGCAGAGCCC CACCGAGCAG
GTGGAGGACT GGCAGCTCGC CGAGGCGGGG TCGCATACGT CCAGTGGGCT CAAGAGCGCG
GAGACCGAGG CGTTGGAACA CCTGCCGGAC AGTGACATCA AGGACGCCCT GCAGGCCCTG
CCCGAGGACT TCCGCATGGC GGTGTACCTC GCCGACGTCG AGGGCTTCGC CTACAAGGAG
ATCGCGGAGA TCATGGGTAC GCCGATTGGG ACCGTGATGT CCCGGTTGCA CCGCGGTCGC
CGGGGTCTGC GGAAGTCCCT GGAGAAGTAC GCCTTGGACC GTGGGCTCGT GGCGGCCGGT
TCCGCCGACG GCGAGGGCGG TGCGTCGTGA
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| Protein sequence | MTPGSSTGRR RSAQARTAAG RPLPSVAPMR APALAGVSSA LEGRSRVARS GVVDAGWAAG
EHDGEEVILV DETTEERGAR FEQDALPYLD QLYAAALRMT RNPADAEDLV QETFVKAFAA
FHQFQAGTNL KAWLYRILTN TFINTYRKRQ RQPLQSPTEQ VEDWQLAEAG SHTSSGLKSA
ETEALEHLPD SDIKDALQAL PEDFRMAVYL ADVEGFAYKE IAEIMGTPIG TVMSRLHRGR
RGLRKSLEKY ALDRGLVAAG SADGEGGAS
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