Gene Francci3_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3758 
Symbol 
ID3906042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4506358 
End bp4507131 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content73% 
IMG OID637881084 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_482838 
Protein GI86742438 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTTC TCGGTCATCG TGGCAGCAGG GTTCCCGGCC CGGAGAACAC GGTCGAGGCG 
GTGGATGCCG CGTTGCGGGT GGGCGCCGAC GGTGTCGAGG TCGACGTGCG GCGCAGCGCG
GACGGCGACC TGGTCTGCGT GCACGACGCG CGGCTGTCCC GTCCCGCCGG CCGGGCCGTG
GTCCGGCAGA CCACGGTGGC GCTGCGGGCC CGGGGCATCC CTCTGCTCGA TGAGATCCTC
GACGTGTGGG ATGGCCGCGG TCGGCTCATC TGTGAGATCA AGAACCAGCC CGGGCAGCCG
GACTTCGACG CCCCCCGGGA GCAGACCGCG CGCCGGCTCG CCGAGACGCT GCGTGCCCGG
GGATGGACCG GCCGCCGGCC GGACGCCGCC GACCTTGACG CCGGTGCCGG CGGCATCACG
GTGTCGTCGT TCGACTGGTT TGCCATCGAG GCGGTGCGTG ACGCCGACCT CGCGGTCACG
ACGGCGTTCC TCACCATGCC CCGGATGTCG GTGAGCGGCG GCCTCGCCTA CGCACGGTCG
GCGGGCCACA CCGAACTGCA TGTGCACACC AGCGCGGTGC TCGGCACCTC CGACGCGGCG
GGACGGGCGC GCGAAGCCGG CATCCGGTTG ATCACCTGGA CGGTGACCAG TCTCGAGGAC
GCCCGGCGGA TCCGCGACGC GGGCGTCACC GGGGCGATCT GCGACGACCC CATGGAGATC
CACCAGGCGC TGTCCCGGCC GGACGGGACC CCCACCACGG CGCTCGACGC CTGA
 
Protein sequence
MEVLGHRGSR VPGPENTVEA VDAALRVGAD GVEVDVRRSA DGDLVCVHDA RLSRPAGRAV 
VRQTTVALRA RGIPLLDEIL DVWDGRGRLI CEIKNQPGQP DFDAPREQTA RRLAETLRAR
GWTGRRPDAA DLDAGAGGIT VSSFDWFAIE AVRDADLAVT TAFLTMPRMS VSGGLAYARS
AGHTELHVHT SAVLGTSDAA GRAREAGIRL ITWTVTSLED ARRIRDAGVT GAICDDPMEI
HQALSRPDGT PTTALDA