Gene Francci3_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3750 
Symbol 
ID3906034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4497869 
End bp4498849 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content73% 
IMG OID637881076 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_482830 
Protein GI86742430 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.220765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTAGCCG CCGCCGCCAT GTCCCTCCAC CCCGATTCCC CGCTCGACGG CCTGGCCATC 
GGGGAGCAGC CCGAACCCGC GCCGCTCGAC GGGTGGGTCA CCGTCACGGT GCGGGCCGCC
TCGCTCAACC ATCACGACCT GTTCAGCCTG CGTGGAGTGG GCCTGCCGGC GGATCGGCTC
CCGATGATCC TCGGCTGTGA CGCCGCCGGG GTGACCCCCG ACGGGCAGGA GGTCATCGTC
CACAGCGTGA TCGGTGATCC GGCAGCGGGC GGGGGGGACG AGACGCTGGA CCCGAAGCGG
ACCCTGCTGT CCGAGCTGTA CCCGGGAACC CTTGCCGAGC GGGTCGCCGT GCCGCGGCGC
AACCTGATCC CGAAGCCCGC AGGGTTGTCG TGGGAGGAGG CCGCCTGCCT GCCGACCGCC
TGGCTCACCG CCTACCGGAT GGTCGTCTCC CGGGCGGGGC TGCCCGCCGG GGGCGGCGGC
ACCGTGCTCA TCCAGGGAGC CGGTGGGGGG GTGGCCACCG CGGCGCTGCT GATCGCCAAG
GCCGCCGGGC ACACCGTTTT CGTGACCTCG CGGGACGAGA CCAAGCGGAA GCGGGCGGCC
GCCCTCGGCG CCGACGAGGT TCTCGAACCC GGTGCCCGGC TGCCGCGCCG GGTCGACGCG
GTCATCGAGA CCGTCGGCGC CGCCACCTGG GGTCACTCGG TGAAGGCAGT GCGCCCCGGC
GGGCGCATCG TGGTCTCGGG CGCCACCAGT GGTCCGAACC CGCCGGCGGA CCTCACCCGG
ATCTTCTTTC TCCAGCTGTC GGTGATCGGT TCCACCATGG GGAGCCGGGA CGAGCTAGTC
GATCTCGTTG CATTCGTGGA ACGGACCGGG GTGCGGCCGC TGATCCACGA GGTGCGCCCG
TTGGCCGATG CCCGGGCCGC CTTCGAGCAG CTGCTCGGCG GTGAGTTCTT CGGCAAGTTG
ATACTCCGCC CCCCCGCCTA G
 
Protein sequence
MLAAAAMSLH PDSPLDGLAI GEQPEPAPLD GWVTVTVRAA SLNHHDLFSL RGVGLPADRL 
PMILGCDAAG VTPDGQEVIV HSVIGDPAAG GGDETLDPKR TLLSELYPGT LAERVAVPRR
NLIPKPAGLS WEEAACLPTA WLTAYRMVVS RAGLPAGGGG TVLIQGAGGG VATAALLIAK
AAGHTVFVTS RDETKRKRAA ALGADEVLEP GARLPRRVDA VIETVGAATW GHSVKAVRPG
GRIVVSGATS GPNPPADLTR IFFLQLSVIG STMGSRDELV DLVAFVERTG VRPLIHEVRP
LADARAAFEQ LLGGEFFGKL ILRPPA