Gene Francci3_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3746 
Symbol 
ID3906030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4490548 
End bp4491879 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content72% 
IMG OID637881072 
Producthypothetical protein 
Protein accessionYP_482826 
Protein GI86742426 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTGC AGCCTGGCCG AGGAAGGATC GAGGGACGGC ACTACCTGCC CTCCACCCCC 
GAGACCATCA GATGGGGTGA GCTGCCGAAC GCCCTGACCA GGCCGGTTCT CAGTATCGAC
TCCGGCGCCA CGGTCACCTT CGACACGGTC AGCCAAGAGG GGATCCTCTG CGACCAGGGG
CGCGATCCCG ACGCCTTCTT CGCCGGTTTC GGGGTCGCGC CGTCGGAGGT GCTGGCCGAC
GCCCGGGCGA TCGCCGCTTC GGGTATCCCG CACCGGTTCG GGGTGGACGG TCCCCACATC
GTCACCGGAC CGGTGTTCAT CCGGGGCGCG GAACCGGGGG ACGTGCTGCG GGTTGAGGTG
GTCTCGCTGC ATCCCCGCGC ACGGTATGGG ATCGTCTCGA CCCGCCATGG CGCGGGCCTG
CTTGCAGGGG AGTTCCCCGA GGGGGGGCCG CCGGACGCGG ACGCCGACGC CCGCCATTGG
CGACGCTTCC GCACCGTTAC CACCTTCTGT GCGGTGGAGC GCCGGCGGGG CCGCCTGTTC
GGCGCCCTGA CCAGCGTGAA CGGCAGCAGG ACCCGGTTTC CGTTGGCGCC GTTCCTGGGC
ATCATGGCGG TCGGCGTGGA CACTACCACC AAGATCGTCC CCTCCACCTC GATCGGTCTG
CACGGCGGCG CCCTGGACTG CCGGGAACTC GGCGCGGGCG CGCGGCTGTT CCTGCCGGTC
CAGGTGAGCG GCGCGTTGTT CGCCGTCGGC GATCCGCATT ACGCCCTCGG GGACGGGAAG
ATCGGTGCCA CCGCCCTGGA TGGCCCGCTA CGGGCGACGC TGCGGCTGAC CGTGCTGCGT
GACACGGCGG CCCGGTCGGT TCTCGGCGCG CTGCGGGAAC CGTTCATCGA GACCGACACG
GCCTGGGTCA CCCTGGGGCT CGACGTTGAC CTCGCCGAGT CCGTCCGCCG CGCGGCGCGG
TCGGCGGTGG TCTTCCTGCA GAGCCGGGTC GGGCTCGACC GGACCGAGGC GCTCGCCTAC
CTGTCCGCCG CGGCCGACTT CGGGGCCTGC CAGCTCGGCA CCGGCACCCA GAGCGCGTTC
TGCCGCATCC GTCGGGCGGA CTTCACCGAA CTGCCGATCG CGAAGCCGCG ACTGCCGCGA
TCCGGACTCG TGCGGATCGT CGGCGTGGGC GACTCGGAGA CCGAGGACCC GACGGATCCG
GAACACGCCG CGGAGAAGAC GCCGGATCGG GCCGACGAGA AGATCGGTCG CGCGGTGCGG
ATTCACTGGG CCGAGCCGGC CGGTGCCTCA CCCCCGATCG ACGCGGAAGC CGGCGGCCCG
GACACCCCGT GA
 
Protein sequence
MALQPGRGRI EGRHYLPSTP ETIRWGELPN ALTRPVLSID SGATVTFDTV SQEGILCDQG 
RDPDAFFAGF GVAPSEVLAD ARAIAASGIP HRFGVDGPHI VTGPVFIRGA EPGDVLRVEV
VSLHPRARYG IVSTRHGAGL LAGEFPEGGP PDADADARHW RRFRTVTTFC AVERRRGRLF
GALTSVNGSR TRFPLAPFLG IMAVGVDTTT KIVPSTSIGL HGGALDCREL GAGARLFLPV
QVSGALFAVG DPHYALGDGK IGATALDGPL RATLRLTVLR DTAARSVLGA LREPFIETDT
AWVTLGLDVD LAESVRRAAR SAVVFLQSRV GLDRTEALAY LSAAADFGAC QLGTGTQSAF
CRIRRADFTE LPIAKPRLPR SGLVRIVGVG DSETEDPTDP EHAAEKTPDR ADEKIGRAVR
IHWAEPAGAS PPIDAEAGGP DTP