| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3745 |
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| Symbol | |
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| ID | 3906029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4485421 |
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| End bp | 4490505 |
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| Gene Length | 5085 bp |
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| Protein Length | 1694 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637881071 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_482825 |
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| Protein GI | 86742425 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC AGACCGCCGG CCCCGAGCGG CATGCCGCCC TCGCGGACCG CTGTCACCGG
CTGGTGCGGT TCCTCCATGA GGTCGCGGCG GCCCGGTCGG GCCGGATCCG GACCATCGAG
GAGCATCCGC TCACGGTGTG GCTCGCCGAC ATCCCGGCCG GCGTGCCGCT GTCCGAGCAC
GCCGGGGCCG GCGAGGTGCT GCTGACCGCC CCCGCCGCCA CCGTCCTACC CCCACCGCCG
CCACCGCCCG CGATCCTCGC CGGCCAGATC GTGCTGCCCG ACGCGGCCGG CGCCGATCCC
GACCAGCCGC CGGTGTGGAA CGGCGCCGCC GCCGAGCAGA CCGCCGCCGA GCAGACCGCC
GCGGCGGCGG CCTACCAGGC CTGGTTGCCG CGATGGCAGC TCTGGGCGAC ACGCGCGCGC
GTTGACGCGG AGCGACGCAA TCTGCACAAC ACGCTGCACG CGGTCGCGGC CCGGGTGGCC
CAGGAGGGTG ACGCGCTGGA ACTCGTGCTG GCGACCGGCC TGCTGACCTG GCAGCCACCG
GGCGGCCCCA CCGTCCGCGA GCACCTGCTG ACCACCCGGC TGACCTGCGA CATCGACCCG
GTCACCTCCG ATATCAGGGT GCGGGTCCCG GCGGGGGCCA CCACGCGCCT CGCCGACGGC
CCGCTACTCG ACGGCATCGC CGGCTTCCGC CGGGAACGGA CGAACGCGCT GCACGAGCGC
CTGCGGGGAC GACCGTCGGC GCCACTGGGT CCGGACGACA TCCGGCTGCT GCGGGACTGG
CTGGCGCTGG CGCTCGACGT GCCGACGGAC GGCTTCGAAC CCGACCTCGC GCCGCCCGCG
CCCGACAGCG CGTCACGCCC GCGGGTGACC TTCGCCCCGG CCTTCGTCCT GCGCACCCGT
GACCAGGCCG CCCTGCTGAC CTACTACGAG CGGATGCTCG ACGTCCTGCG GGGTGACGGA
CCTCCGCCGC TCGGCCTCGT CCAGCTGGTG GAGACCCTCG ACGCCGCCGA CCGGTTGGCC
TGGCTCGAGG CAGAGGGAGC GACGAGCGGC GCCGAACTCG GTGCGGACCC GCTGCTCCCG
CTCCCGGCCA GTCCCGAGCA GGCCCGGGTG CTGGAGCGGC TTCGCCACGA CAACGGCGTC
GTCGTCGAGG GCCCGCCCGG CACCGGCAAG ACGCACACGA TCGCCAACCT GGTCTGCGCC
TTGCTGGCGG AGGGGCAACG GGTTCTGGTC ACCAGCCAGA AGTCGCAAGC CCTGCGGGTC
CTGCGGGAGA AACTGCCCCC GGACCTGCAG CGGCTGTGCG TGTCGTTCAC CGATACCGAG
GAGGCGCGCG ACGCACCGGT CGACCAGGCC GGGAACGCGG GGGCGGACCT GGACGGCCGG
CCCGACGCAG TCTTCGACCC CGCCCCGGCC GGGGCCGAAG ACGAAGCGGA CGAGCTTGGC
GGCATCGGCG TGGGTTCCCC CGAGCTCGCC GCGAGCGTGA GCGCCCTGGC CGCGGAGAAG
GCCACCTATC ACCCCGAGGC GCTCGACCGG CGGATCGTGC GGGCCGCCGC GCGCCGGCAG
GAGGCGATCC GCGCCCGCGA TGTCCTGGCG GACCGGGCCC GCGCCCTGCG GTTGGCCGAG
CACACGGTGC ATCCGGACAG CGAGGTGGCC GCGGGCTGGG GCGGGACGCG GGCGAGCATC
GCGGCGCGGG TCCGGGCCGA GGCCGACGCG TCGCGGTGGC TGCCGCGGCC CGTGCCCCGG
AGCGCGGCAG CCACCACCAC CGCGAGGACC ACGGCGACGG GGTCCGGGTC TGTCGGCCCT
GCGCCGGTTC CCCCGCCGTT GACCGACGCC GAGGCGCTGG AGCTCCACGC CCTGCTGCGA
TCCGGTCAGG TGCGATCCGG TCAGGTGCGA TCCGGTCAGG ACGTCGGCGC GGACCGGTCC
GCCGGCCCGG TGGTCGAGAT GAGCCGATTC CTACCCGCCG AGCGGTTCGC GGACCTGGTG
GCCACCGCCC GCGCGGCCGA CGAGGCGGTC CGCCTTGCCC GCGCGGCCGT CCGTCCCGCG
ACCCGGGGTC TCCTCGACAC GCTCGCCGCC GTCGATCCCG CGGTGGTCTC CCTCGATCCG
CTACAGCAGG CGGTCGCCAG CCTCTCCCGC GCGCTCGAGG AGCTCGACGG GCGCGGGCAG
CGGTCGAACA GACGGCACTG GGTTCCGGCG GCCCTCGACG ACGCCCTCGC CGGCCGGGAC
CGGGTCCTCT GGGCGAAGGT GGCCGCGGCC ACGCCGATGA TCGCCGAGGC GACGCGGCAC
GTGACCGAGC TCGGTCTGCA CGCGGTCGCC CTTCCGACCT CCGCCTCCCC GGACGGCTCC
GCCTCGGCGG CCGACGCCGG CTCCCCGGCG GATCCGGGCT TCGACCCCGC CGCCCTGCTC
GCCCGGGGGG AGGCGCTGCG CGAGTACCTC GACGCCGGGG GCGAGCTACG GCGCAGGTTC
CGGCCGAAGG TCCAGAAGGA GGCGGACACG CTGCTGACCC GGACGCTGGT GGACGGCGTC
GCGCCGACCA CCCCGGAGCT GCTCGATCTC GTGCTCGTCC GGCTCCGGGC GGAGGTCGCG
GTCGAGGCCG CGACCCGCGG ATGGGTCCTG GTCGGGATCG CGCCGCGGCC CACCGATCCC
TTCGAGGTAC GCCTGTCCCG GCTGGTTGAG GCGCAGGAGG CCGTCACGGA GATCCAGGCG
ATCGTGGCGG CGCGGAACCG GGTCGTGGCA ATCCTGGAGG ACATCGTGCC CGGCCGGGCA
CCGGCGATGG ACTCCGCCGA GCGCGTCCGG GATCTCGCGG CCGTCATGGC CGCGCTGCGC
CCGATGGCAG CCGCCACCGA CGCCGAGCGG GCGCTGGGGG AACTGCGGGA GGGCTACGCC
GGGCTTGCCA CCGCGGCGGG CACGCCGTCC GAGGTCGCCG AGCTGGCCGG CGCGGTAGCG
GCCCGCAATG TGGCCGCGTA CACGCGGACC CGGGCCGCGC TCGCCACCAC CATGGCTGCC
CGGGAGGTGG CGCTGCGCCG GGACGAGCTG CTCGGCCGGC TGCGCGCGGC GCATCCCGAC
CTCGCCGATC TCCTCGTCTC GACGGCCGGC GCGACCCGGC CCAATGGAGC GGAGATCTGG
CCGGCCAGGC TCGCGGCGTT CACGACCGCC TGGTCCTGGG CGGTGGCCGC GAGCTGGCTG
ACCGCCACGG CCCCCGGCGC CGCCACGGCC CCCGGCGGCC CGGCTGGACC ACCTGTCGAT
CTGGACGCCG AGCTGGACGC GGCGGAGGAC ATGGTCGCCG CGGCCACCGC GGAGCTGGCC
GGCGCCCGCG CGTGGAAACA CTGCCTCGAA CGGATGGGCG CCGAGCAGTC GGCCGCGCTG
CGCGCCTATG CCGACGCGGT GGCGGCCAGC GGCACCTTCG GCGGCCGCCA CGCCGAGCGT
TTCCGCCAGG CCGCCCGGGA GGCGATGGAG ATCGCCCAGA CGGCGGTGCC GGCCTGGGTC
ATGCCGATCC GGGAGGTGCT GTCGACGATC CCGGCGGTGC GCGACAGCTT CGACGTCGTG
ATCGTCGACG AAGGCAGTCA GGCCGGGCTC GACAGCCTGT TCCTGCTCTG GCTCGCCCCA
CGGGTGATCG TCGTGGGCGA CGACCGGCAG TGCACGCCGC CGGTGGAGGT CACGGACGAG
CTCGACCGGG TCTTCGACCG GCTGGAGGCC CTGCTGCCGG AGGTGCCGGC GTGGCTACGC
GTCGGGTTCA CCCCCCGGTC GAGCCTGTTC ACGCTGTTGC GAACCCGCTT CGGCGAGGTG
ATCCGGCTGC GGGAGCACTT CCGGTGCATG CCGGAGATCA TCGAGTGGTC GTCGGCCATG
TTCTACCGGG ACGCGCCGCT GCTTCCCCTG CGCCAGTTTG GCGCCGACCG GCTGCCGCCG
CTGGTGGCCC GGTTCGTTCC CCACGGTTTC ACCACGGACG CGGGCCTCGG TCCACGCAAT
CCGGCCGAGG CCGATGCCCT GGTCGCACAG GTGCTCTCCT GCGCCGAGGA TCCCCGGTAC
GCCCGGCTCT CCTTCGGCGT CGTCGTCCCA CAGGGCACCG CACAGGCGGC GCTGATCCGC
GACCAGCTGG CCGACCGGAT GTCCGCCGCC GAGCACCAGC GTCGACGGCT GCGGGTGGGC
GTCCCCGCCG ACTTCCAGGG TGACGAGCGC GACGTCGTCT TCCTGTCCCT GGTGGTGGCG
CCCGACTCGC GCATCACCCC GCTGACCCGG CTGGAGTACC AGCGGCGGTT CAACGTCGCG
GCCTCCCGGG CCCGCGACCA GGTCTGGCTG TTCCACTCCG TACCGGTCAC CAATCTTGAC
CCTCGCGATC TGCGGCACAA CTATCTGAGC TACGTGCTGT CCACGACGCA CCCGGCGGCC
GGCGGCCGCG GCGAGGAGCC CCCGGCACTC GCCGAAGTGC CGACCAACCG TCCGCATCCG
GCCTTCGGAT CCCTGTTCGA ACAGCGGGTC TTCCGGGAGA TCGTCGGCCG CGGCTACCTG
GTCACCCCGC AGGTGGAGAT CAACGGTCGG CGGGTCGACC TGGTCGTCTC CGGCGGTCGG
GCCCGGCTCG CCGTCGAGTG CGACGGGGAC GTCGGCTCCG GTCCGGACGA GATCGCGCAC
GAGTTCGCCC GGGAGCGCGA GCTGCGCCGG GCGGGCTGGC GGTTCTGGCG GGTCCGCCAG
TCCGAGTTCG AACTCGACGC CGACGCCGCG TTGGCCTCGT TGTGGCCGCG GCTGGCGAGG
GCCGGTATCG CGCCCGTGAA CACCGGGGCG CGAGGACTGC GGGACGAGGC CGCCACCGGC
CTCCCCCGCG TCGAACATTC CACCGTCCGG GCGAGCGCCG ACGAGGCGCT GCACCGGTGG
CGGCCCATCG CCCTGTCCGA TCTGGAGGGC CTCGACGACG CACCGCCGGA CGCCGATCCG
CGCGGTTCGG CCCGTGATTC GGCCCCTGCC CTCCGGCGAG GCACGGGCAC GGCCCCGGGC
GCCGGTGGGG GAGACTGCTC CCCGCGTGCC GAACGGGTCG GTCAGGCCGG CGGCCCGGTC
ACCCCGTCCG GTTCGAACGG CGCCGGCAGG ACGTCGGGAT CGTGA
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| Protein sequence | MTTQTAGPER HAALADRCHR LVRFLHEVAA ARSGRIRTIE EHPLTVWLAD IPAGVPLSEH
AGAGEVLLTA PAATVLPPPP PPPAILAGQI VLPDAAGADP DQPPVWNGAA AEQTAAEQTA
AAAAYQAWLP RWQLWATRAR VDAERRNLHN TLHAVAARVA QEGDALELVL ATGLLTWQPP
GGPTVREHLL TTRLTCDIDP VTSDIRVRVP AGATTRLADG PLLDGIAGFR RERTNALHER
LRGRPSAPLG PDDIRLLRDW LALALDVPTD GFEPDLAPPA PDSASRPRVT FAPAFVLRTR
DQAALLTYYE RMLDVLRGDG PPPLGLVQLV ETLDAADRLA WLEAEGATSG AELGADPLLP
LPASPEQARV LERLRHDNGV VVEGPPGTGK THTIANLVCA LLAEGQRVLV TSQKSQALRV
LREKLPPDLQ RLCVSFTDTE EARDAPVDQA GNAGADLDGR PDAVFDPAPA GAEDEADELG
GIGVGSPELA ASVSALAAEK ATYHPEALDR RIVRAAARRQ EAIRARDVLA DRARALRLAE
HTVHPDSEVA AGWGGTRASI AARVRAEADA SRWLPRPVPR SAAATTTART TATGSGSVGP
APVPPPLTDA EALELHALLR SGQVRSGQVR SGQDVGADRS AGPVVEMSRF LPAERFADLV
ATARAADEAV RLARAAVRPA TRGLLDTLAA VDPAVVSLDP LQQAVASLSR ALEELDGRGQ
RSNRRHWVPA ALDDALAGRD RVLWAKVAAA TPMIAEATRH VTELGLHAVA LPTSASPDGS
ASAADAGSPA DPGFDPAALL ARGEALREYL DAGGELRRRF RPKVQKEADT LLTRTLVDGV
APTTPELLDL VLVRLRAEVA VEAATRGWVL VGIAPRPTDP FEVRLSRLVE AQEAVTEIQA
IVAARNRVVA ILEDIVPGRA PAMDSAERVR DLAAVMAALR PMAAATDAER ALGELREGYA
GLATAAGTPS EVAELAGAVA ARNVAAYTRT RAALATTMAA REVALRRDEL LGRLRAAHPD
LADLLVSTAG ATRPNGAEIW PARLAAFTTA WSWAVAASWL TATAPGAATA PGGPAGPPVD
LDAELDAAED MVAAATAELA GARAWKHCLE RMGAEQSAAL RAYADAVAAS GTFGGRHAER
FRQAAREAME IAQTAVPAWV MPIREVLSTI PAVRDSFDVV IVDEGSQAGL DSLFLLWLAP
RVIVVGDDRQ CTPPVEVTDE LDRVFDRLEA LLPEVPAWLR VGFTPRSSLF TLLRTRFGEV
IRLREHFRCM PEIIEWSSAM FYRDAPLLPL RQFGADRLPP LVARFVPHGF TTDAGLGPRN
PAEADALVAQ VLSCAEDPRY ARLSFGVVVP QGTAQAALIR DQLADRMSAA EHQRRRLRVG
VPADFQGDER DVVFLSLVVA PDSRITPLTR LEYQRRFNVA ASRARDQVWL FHSVPVTNLD
PRDLRHNYLS YVLSTTHPAA GGRGEEPPAL AEVPTNRPHP AFGSLFEQRV FREIVGRGYL
VTPQVEINGR RVDLVVSGGR ARLAVECDGD VGSGPDEIAH EFARERELRR AGWRFWRVRQ
SEFELDADAA LASLWPRLAR AGIAPVNTGA RGLRDEAATG LPRVEHSTVR ASADEALHRW
RPIALSDLEG LDDAPPDADP RGSARDSAPA LRRGTGTAPG AGGGDCSPRA ERVGQAGGPV
TPSGSNGAGR TSGS
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