Gene Francci3_3743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3743 
Symbol 
ID3906027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4480678 
End bp4481673 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content71% 
IMG OID637881069 
Productmethyltransferase type 11 
Protein accessionYP_482823 
Protein GI86742423 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA CGGCGGCATC CGCGGCGACC TCCACCGCGT CCACGGCTGC GGCTTCCACG 
GCTCCCCCCG CAGGCTCGAG GCAGGCCCCG ACACCCTCCG CGGCGACCCC GGAACCGGGT
GGCGAGTCCC GGGCCGCGGC TTTCGGGACC GCGCCGCCGG CCGGCCCGTC CGGCCCGGTG
CCGGCGAGCG GAGCGGGCAC GGCGAGCGGA GCGCAGGCGG CGGCCACTCC CCGCGAGCGG
ACCAAGGAGG GTCCGCTGGT GCGCGCCCTG CCCTATTCCG GGTTCGGACT GTCGCGCTCG
AAGACGCTGT TCCTCGCGCA CCGCAAGGAG CCCGTCGACC CGGCTGGCTT CTACTCGCTG
ATCGCCGCGG ACTCCGTGCG CCAGCTGATG CGGTACACAT CCCTGACCGG CCAGCTCGTC
CTCGACGTCG GCGGCGGCCC GGGTTACTTC CGCTCGGCCT TCCTCGACGC CGGCGCCCGG
TACGTGTGGG TCGAGCCGGA CGTCTCGGAG ATGGAGGCCG GTGGCATCGA GGTTCCCGGC
CGGGTCCGGG GCAGCGCCTT GGACCTGCCG TTCCTCTCCG GAAGCGTTGA TCTCTGCTAC
ACGTCAAACG TGCTCGAACA CGTCCCCGAC CCGTGGCGGA TGTGCTCCGA ACTGGCCCGG
GTGACCCGCC CTGGCGGGCT CATCTTCCTG AGCTACACGA ACTGGCTGTC CCCCTGGGGC
GGCCACGAGA CCGCACCCTG GCACTATCTG GGTGGTGACC GGGCGGCGGC GAGGTTCGAA
CGCCGCAAGG GCAAGGCGCC GAAAAACATC TACGGCAAGA CTCTATTTCC GGTGTCGGTG
GCCGACACCC TCGCCTGGGC GAAGCGGCGG TCCGACGTCG AGATCCTCGA CGCGATGCCG
CGCTATCTGC CCGACTGGGC GAAGGTGATC ATCAGGATTC CCGGTGCCCG CGAGATTGTG
ACCTGGAACC TCGCGATGGT GTTGCGCAAG CGCTGA
 
Protein sequence
MSDTAASAAT STASTAAAST APPAGSRQAP TPSAATPEPG GESRAAAFGT APPAGPSGPV 
PASGAGTASG AQAAATPRER TKEGPLVRAL PYSGFGLSRS KTLFLAHRKE PVDPAGFYSL
IAADSVRQLM RYTSLTGQLV LDVGGGPGYF RSAFLDAGAR YVWVEPDVSE MEAGGIEVPG
RVRGSALDLP FLSGSVDLCY TSNVLEHVPD PWRMCSELAR VTRPGGLIFL SYTNWLSPWG
GHETAPWHYL GGDRAAARFE RRKGKAPKNI YGKTLFPVSV ADTLAWAKRR SDVEILDAMP
RYLPDWAKVI IRIPGAREIV TWNLAMVLRK R