| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3726 |
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| Symbol | |
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| ID | 3903827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4460823 |
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| End bp | 4462283 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881052 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_482807 |
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| Protein GI | 86742407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.575274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.503349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAGG CCAGGCGGCA TGAGGCAGGC AGAGGCGAGA TGAGCGAGAT CGACAGCCCG
GCGGTGGTGC CGTTGGAGGA GAAGCCGTTG GAGGAGAATC TGTGGCCGGC CACGGCCCGG
CTGGACGCCG ACGGTGTGCT GCGAATCGGT GGGATCCGGG TTAACGAGCT GGCCGCCGAG
TTCGGCACGC CGGCCTTCGT TCTCGACGAG GCCGACTTCC GGGCCCGGTG CGCGGCTTGG
CGGCGGGCGT TCGCCGAATG TGACGTCTAC TACGCGGGCA AGGCCTTTTT GTGCCGCACG
ATCGCTCGCT GGGTGGATGA GGGGGGTCTG AATCTCGACG TCTGTACGGG CGGGGAGCTC
GCGGTGGCCC GCTCGGTCGG TTTCCCGGCG GATCGACTGC TCTTCCACGG CAACAACAAG
TCCGTCGCGG AACTGCGGGC AGCCGTCGGC TATGGCGTCG GGCGGATCGT CGTCGACTCC
TTCGCCGAGA TCACCCGCCT GGCAGCCGTC GCCGCCGAGG CGGGCGTGCG CCAGCGCGTG
CTGATCCGCG TCACCCCGGG CGTGGAGGCG CACACACATC ACTACGTCTC CACCGGGCAG
GAGGACCAGA AGTTCGGGTT CTCGCTGGCC GGCGGGTCGG CGGCCGAGGC GGTGGAACGC
GTGCTCGCGG CCGCCGGCTC CCTCGAACTC GTCGGCCTGC ACGCGCACAT CGGCTCGCAG
ATCTTCGACA CGGCCGGGTT CGGCCTGGCG GCGCACCGCC TGGTGGGCCT GCTCGCGCGC
ATCCGCGACA CCCACGACCT CGAACTGCCC GAGCTCGACC TCGGCGGTGG CCTCGGCATC
GCCTACACCG GCGAGGACGC CCCGCTGGAG GTCACCGACG TCGCCGAGCG GCTGACCGCC
GTGGTCGGCA AGGAGTGCGC CGCCGCGGGC CTGACCGTCC CGCGCCTCGC GGTGGAACCG
GGACGGGCCA TCGTCGGATC GACGACGGTG ACCCTCTACG AGGTCGGCAC TGTCAAGGAG
CTGCCCGGGC TGCGCACCTT CGTCAGCGTG GACGGCGGCA TGAGCGACAA CATCCGCACG
GCGCTCTACG ACGCCCGCTA CACCGCCCGG CTGGTCTCCC GGACCGGTTT GGCCACGACG
CACGTCGTCA CGATCGTCGG CCGGCACTGC GAGTCCGGGG ACGTCGTCGC CCACGACGTG
CCGCTGCCCG ACGACGTCCG GCCCGGTGAC CTGCTGGCCA TTCCCGCCAG CGGCGCCTAC
CACCGGTCGA TGGCCAGCAA CTACAACCAC GTGGCGCGGC CACCGGTGAT CGCCGTGCGC
GACGGCGCGG CCCGGATCAT CGTCCGGCGG GAGACCGAGG ACGACCTGCT GCGCCTGGAC
GTCGATCCGG GCGTGAAGGT CGATCCGGGC GTGAAGGTCG AGCCGGGCGC CGACCCGGCC
TCCCCGGAGG TGGCGCGGTG A
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| Protein sequence | MRQARRHEAG RGEMSEIDSP AVVPLEEKPL EENLWPATAR LDADGVLRIG GIRVNELAAE
FGTPAFVLDE ADFRARCAAW RRAFAECDVY YAGKAFLCRT IARWVDEGGL NLDVCTGGEL
AVARSVGFPA DRLLFHGNNK SVAELRAAVG YGVGRIVVDS FAEITRLAAV AAEAGVRQRV
LIRVTPGVEA HTHHYVSTGQ EDQKFGFSLA GGSAAEAVER VLAAAGSLEL VGLHAHIGSQ
IFDTAGFGLA AHRLVGLLAR IRDTHDLELP ELDLGGGLGI AYTGEDAPLE VTDVAERLTA
VVGKECAAAG LTVPRLAVEP GRAIVGSTTV TLYEVGTVKE LPGLRTFVSV DGGMSDNIRT
ALYDARYTAR LVSRTGLATT HVVTIVGRHC ESGDVVAHDV PLPDDVRPGD LLAIPASGAY
HRSMASNYNH VARPPVIAVR DGAARIIVRR ETEDDLLRLD VDPGVKVDPG VKVEPGADPA
SPEVAR
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