Gene Francci3_3724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3724 
Symbol 
ID3903825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4458413 
End bp4459546 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content71% 
IMG OID637881050 
Productthreonine synthase 
Protein accessionYP_482805 
Protein GI86742405 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0780152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.697204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGA CGTCATCCAC ACCGCTCGCG GACGAGCCGG CCGTGCCGGT GCTGTCCGCG 
GCGCCCGATC GGCCGCACCG GCCGTGGCAG GGAATCATCG AGGAGTACCG GGACCGTCTG
CCGATCGCAC ACGACACGCC CGTCATCACG TTGCGTGAGG GTGGGACGCC CCTGCTGCCC
GCGGCACACC TCTCCGACCT CACCGAATGT GAGGTTCATC TCAAAATCGA AGGGGCGAAT
CCGACTGGCT CCTTCAAGGA CCGCGGGATG ACGGTGGCCA TCAGCCGGGC TGTCGGCGCC
GGTTCCCAGG CTGTCATCTG CGCGTCCACC GGCAACACCT CGGCGTCGGC CGCCGCCTAC
GCGGCCCGCG CCGGCATCAC CTGCGCGGTG CTGGTGCCCA GCGGAAAAAT TGCCCTGGGC
AAGCTCGCCC AGGCGCTTGT CCACGGGGCC CGGCTGCTGC AGCTCGACGG CTCCTTCGAC
GACTGCCTGC GGGTGGCGCG CGAACTCGCC GACACCTCGC CGGTGACCCT GGTCAACTCG
GTGAACCCCT TCCGTCTCGA GGGGCAGAAG ACGGCGTCCT TCGAGATCGT GGAGGCGCTC
GGCCGGGCCC CGGACGTCCA CTGCCTGCCG GTCGGCAACG CCGGCAACAT CACCGCTTAC
TGGCGGGGCT ACCTCGAGGA GAACAACCGG ATCGCCAGCG GCCGCCCGCG GATGTGCGGT
TTCCAGGCAG CGGGTGCCGC GCCCATCGTG CGGGGCGAGG TGGTGACCTC GCCGCAGACG
ATCGCCACGG CGATCCGCAT CGGCAACCCG GCGTCGTGGG ATCTCGCTGT CGAGGCGAGA
GAGGCCTCCG GTGGTCTGAT CGACGCCGTG AACGACCGGG AGATCCTCGC CGCCTACCGC
CTGCTGGCCC GCAGGGAGGG CGTCTTCGTG GAGCCTTCCA GCGCCGCCAG CGTCGCGGGC
CTGCTGAAGG CACGGGCGGC CGGCCGGATT GAACCCGGCG AGCAGGTCGT GTGCACCGTC
ACGGGCAACG GGCTCAAGGA CCCCGACTGG GCGATCAGCG GCGCGGCCCG GCCGGAAACG
ATCCGCCCGA CCGTCGCGGG CGCCGCCGAG GCGCTGGGGC TGCAGCGCTC GTGA
 
Protein sequence
MTTTSSTPLA DEPAVPVLSA APDRPHRPWQ GIIEEYRDRL PIAHDTPVIT LREGGTPLLP 
AAHLSDLTEC EVHLKIEGAN PTGSFKDRGM TVAISRAVGA GSQAVICAST GNTSASAAAY
AARAGITCAV LVPSGKIALG KLAQALVHGA RLLQLDGSFD DCLRVARELA DTSPVTLVNS
VNPFRLEGQK TASFEIVEAL GRAPDVHCLP VGNAGNITAY WRGYLEENNR IASGRPRMCG
FQAAGAAPIV RGEVVTSPQT IATAIRIGNP ASWDLAVEAR EASGGLIDAV NDREILAAYR
LLARREGVFV EPSSAASVAG LLKARAAGRI EPGEQVVCTV TGNGLKDPDW AISGAARPET
IRPTVAGAAE ALGLQRS