Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3724 |
Symbol | |
ID | 3903825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4458413 |
End bp | 4459546 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881050 |
Product | threonine synthase |
Protein accession | YP_482805 |
Protein GI | 86742405 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0780152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.697204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCACGA CGTCATCCAC ACCGCTCGCG GACGAGCCGG CCGTGCCGGT GCTGTCCGCG GCGCCCGATC GGCCGCACCG GCCGTGGCAG GGAATCATCG AGGAGTACCG GGACCGTCTG CCGATCGCAC ACGACACGCC CGTCATCACG TTGCGTGAGG GTGGGACGCC CCTGCTGCCC GCGGCACACC TCTCCGACCT CACCGAATGT GAGGTTCATC TCAAAATCGA AGGGGCGAAT CCGACTGGCT CCTTCAAGGA CCGCGGGATG ACGGTGGCCA TCAGCCGGGC TGTCGGCGCC GGTTCCCAGG CTGTCATCTG CGCGTCCACC GGCAACACCT CGGCGTCGGC CGCCGCCTAC GCGGCCCGCG CCGGCATCAC CTGCGCGGTG CTGGTGCCCA GCGGAAAAAT TGCCCTGGGC AAGCTCGCCC AGGCGCTTGT CCACGGGGCC CGGCTGCTGC AGCTCGACGG CTCCTTCGAC GACTGCCTGC GGGTGGCGCG CGAACTCGCC GACACCTCGC CGGTGACCCT GGTCAACTCG GTGAACCCCT TCCGTCTCGA GGGGCAGAAG ACGGCGTCCT TCGAGATCGT GGAGGCGCTC GGCCGGGCCC CGGACGTCCA CTGCCTGCCG GTCGGCAACG CCGGCAACAT CACCGCTTAC TGGCGGGGCT ACCTCGAGGA GAACAACCGG ATCGCCAGCG GCCGCCCGCG GATGTGCGGT TTCCAGGCAG CGGGTGCCGC GCCCATCGTG CGGGGCGAGG TGGTGACCTC GCCGCAGACG ATCGCCACGG CGATCCGCAT CGGCAACCCG GCGTCGTGGG ATCTCGCTGT CGAGGCGAGA GAGGCCTCCG GTGGTCTGAT CGACGCCGTG AACGACCGGG AGATCCTCGC CGCCTACCGC CTGCTGGCCC GCAGGGAGGG CGTCTTCGTG GAGCCTTCCA GCGCCGCCAG CGTCGCGGGC CTGCTGAAGG CACGGGCGGC CGGCCGGATT GAACCCGGCG AGCAGGTCGT GTGCACCGTC ACGGGCAACG GGCTCAAGGA CCCCGACTGG GCGATCAGCG GCGCGGCCCG GCCGGAAACG ATCCGCCCGA CCGTCGCGGG CGCCGCCGAG GCGCTGGGGC TGCAGCGCTC GTGA
|
Protein sequence | MTTTSSTPLA DEPAVPVLSA APDRPHRPWQ GIIEEYRDRL PIAHDTPVIT LREGGTPLLP AAHLSDLTEC EVHLKIEGAN PTGSFKDRGM TVAISRAVGA GSQAVICAST GNTSASAAAY AARAGITCAV LVPSGKIALG KLAQALVHGA RLLQLDGSFD DCLRVARELA DTSPVTLVNS VNPFRLEGQK TASFEIVEAL GRAPDVHCLP VGNAGNITAY WRGYLEENNR IASGRPRMCG FQAAGAAPIV RGEVVTSPQT IATAIRIGNP ASWDLAVEAR EASGGLIDAV NDREILAAYR LLARREGVFV EPSSAASVAG LLKARAAGRI EPGEQVVCTV TGNGLKDPDW AISGAARPET IRPTVAGAAE ALGLQRS
|
| |