| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3722 |
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| Symbol | |
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| ID | 3903823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4454488 |
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| End bp | 4456584 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881048 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_482803 |
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| Protein GI | 86742403 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.672937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.45086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGAC GCCGCCGGCA GGGCACCGGT CTGTCCGCGA TGCTGCTCCC CGAGCTGCAG
GCCATGGCCT CGTCCCTGGG GATCCAGGGC GTGGGTCGGC TGCGCAAGGG CCAGCTCATC
GCCGCGATCC AGAACGTGCA GAACAACGAG TCCGCGGCCG TGACGCCCGT CGCGGCGGCC
CCAGCGACTT CTTCGGCCTC CGCAGCCTCC ACGGCCTCCA CGGCCCTTGC ACCGCCGCCC
CCGGCGGAGT CGGGGCCGGC CTCGCCCGCC GGACCGGTTC CGGCCGCGAG CGAGACATCC
CCCGCGCCGC GGGTGTCCCG GCAGGCTGCC GGCTCGGACG GCACCGCTAC CCGCACCCGT
TCCCGCCGTG GAGCCTCTCG GGCGGCGGCG AGCCCCGCCG CCGAGCAGCC GACCCTGCCC
GAAACGGCGG CTGGGGACAC GGTCGTGGAG ACCCGGGCCG GATCGGTTGT GGACGCCCGG
GCCGGATCGG CCGCCTCCGC CGTGGCTTCG GCCCAGCCGA CCGTGTCCGC CCAGCCGACC
GGGGCGCCCG CGTCGGCTCC GCCGGCCGCC GCGTCCCACC GCCAGACCGA TGCCGGTCCC
CGGAGTCGGG AGGACCGCCG GGATCGTTCC GCCGACAACG GCCGGGTGAG CGCGAGTGAC
CGTCAGGGCG GTGAGGCCGG CGGCGAGCGT GCCACGGCGG ACCGCCAGGG CGCGGACCGT
CGCTCCGGTA CGGACCGTCA GTCCGCTGAT CGTCCCAGCC GCGTGGATCG CACCCAGCAG
GGTGACCGGT CCGGGGCAGA GCGTTCCGGC GGCGACCGGC CCGGGCAGGG AGGGCAAGGG
GGGCAAGGCG AGGACGACTT CGCCGCCCGT GGCCGGCGGG GCCGCTTCCG GGAACGCGGT
CGTAACCGCG GTCGCGGCGG GCAGGCCGGC CCGAGCGAGA ACGAGCCGGT CCTGCGCGAG
GACGACGTCC TGGTCCCCGT CGCCGGCATT CTCGACGTTC TGGATAACTA CGCCTTCGTG
CGGACCAGCG GGTACCTGAC CGGCCCGACC GACGTCTATG TCAGCCTCGC CCAGGTGCGT
CGCAACGGGC TGCGCCGCGG TGACGCCATC ACCGGTGTCG TCCGCGCCCC GCAAGAGGGC
GAGCAGCGCC GGGACAAGTA CAACGCGCTG GTCCGGCTCG ACACCATCAA CGGGATGGAG
CCCGAGGAGG CACGCGGCCG GCCGGAGTTC ACCAAGCTGA CTCCGCTCTA CCCCCAGGAG
CGGCTGCGGC TGGAGACCGA GCCCCACATG CTGACCACGC GGGTCATCGA CCTCGTGATG
CCGATCGGCA AGGGGCAGCG GGCCCTGATC GTCAGCCCGC CCAAGGCGGG TAAGACGATG
GTGCTGCAGT CCATCGCGAA CGCGATCACG ACGAATAACC CGGAAGTCCA CCTCATGGTC
GTGCTCATCG ATGAGCGGCC GGAGGAGGTC ACCGATATGC AGCGGTCGGT CAAGGGCGAG
GTCATCGCGT CCACCTTCGA CCGTCCACCG GCCGACCACA CCAATGTCGC CGAGCTGTCC
ATCGAGCGGG CCAAGCGTCT GGTCGAGTTG GGCCACGACG TCGTCGTGCT GCTCGACTCG
ATCACCCGGT TGGGCCGTGC CTACAACCTG GCGGCCCCGG CCTCCGGTCG TATCCTGTCC
GGCGGTGTCG ACTCGACGGC GCTCTACCCG CCGAAGCGGT TCCTCGGCGC GGCCCGCAAC
ATCGAGAACG GCGGGTCTCT GACGATCATT GCGACGGCGC TGGTGGAGAC CGGTTCGACG
ATGGACACCG TGATCTTTGA GGAGTTCAAG GGAACCGGCA ACGCCGAGCT CAAGCTCGAT
CGCAAGATTG CCGACAAGCG GATCTTCCCC GCGGTGGATG TCGACGCCTC CGGTACCCGC
AAGGAGGAGA TCCTGCTTGC CCCGGACGAG CTCGTGATCA TGCACAAGCT GCGTCGCGTG
CTCCATACCA GGGAGACCCA GCAGGCCCTC GAGCTCCTGC TCGATCGGCT CAAGCAGACC
AGGACGAATT ACGAGTTCCT GATGCAGATC GCCAAGACCG CACCGCCTCA GGATTAG
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| Protein sequence | MTRRRRQGTG LSAMLLPELQ AMASSLGIQG VGRLRKGQLI AAIQNVQNNE SAAVTPVAAA
PATSSASAAS TASTALAPPP PAESGPASPA GPVPAASETS PAPRVSRQAA GSDGTATRTR
SRRGASRAAA SPAAEQPTLP ETAAGDTVVE TRAGSVVDAR AGSAASAVAS AQPTVSAQPT
GAPASAPPAA ASHRQTDAGP RSREDRRDRS ADNGRVSASD RQGGEAGGER ATADRQGADR
RSGTDRQSAD RPSRVDRTQQ GDRSGAERSG GDRPGQGGQG GQGEDDFAAR GRRGRFRERG
RNRGRGGQAG PSENEPVLRE DDVLVPVAGI LDVLDNYAFV RTSGYLTGPT DVYVSLAQVR
RNGLRRGDAI TGVVRAPQEG EQRRDKYNAL VRLDTINGME PEEARGRPEF TKLTPLYPQE
RLRLETEPHM LTTRVIDLVM PIGKGQRALI VSPPKAGKTM VLQSIANAIT TNNPEVHLMV
VLIDERPEEV TDMQRSVKGE VIASTFDRPP ADHTNVAELS IERAKRLVEL GHDVVVLLDS
ITRLGRAYNL AAPASGRILS GGVDSTALYP PKRFLGAARN IENGGSLTII ATALVETGST
MDTVIFEEFK GTGNAELKLD RKIADKRIFP AVDVDASGTR KEEILLAPDE LVIMHKLRRV
LHTRETQQAL ELLLDRLKQT RTNYEFLMQI AKTAPPQD
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