| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3721 |
|---|
| Symbol | rpmE |
|---|
| ID | 3903822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4453818 |
|---|
| End bp | 4454054 |
|---|
| Gene Length | 237 bp |
|---|
| Protein Length | 78 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637881047 |
|---|
| Product | 50S ribosomal protein L31 |
|---|
| Protein accession | YP_482802 |
|---|
| Protein GI | 86742402 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0254] Ribosomal protein L31 |
|---|
| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.506953 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTG ACGTCCACCC GACCTACCAC GAGACGACGG TCACCTGTAC CTGCGGGAAC
ACCTTCACCA CCCGCAGCAC CAAGGAGAAC GGCGTCGTCA ACGCCGAGGT CTGCTCGCAG
TGCCACCCGT TCTACACCGG CAAGCAGAAG ATCCTCGATG TCGGCGGCCG GGTCGAGAAG
TTCGAGCGCC GGTTCGGCCG GCGGCGCCCC GGCGAGAAGG TCGGCGGCGC GAAGTAG
|
|---|
| Protein sequence | MKPDVHPTYH ETTVTCTCGN TFTTRSTKEN GVVNAEVCSQ CHPFYTGKQK ILDVGGRVEK
FERRFGRRRP GEKVGGAK
|
|---|
| |