Gene Francci3_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3701 
Symbol 
ID3903802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4436171 
End bp4436605 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID637881027 
ProductNUDIX hydrolase 
Protein accessionYP_482782 
Protein GI86742382 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.899383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCGG TGAGCGTAGC CGGAGTGACA CTCAACGAAA AAGGGTTGAT TCTATGCATC 
CGCCGCCGGG ACATCGGCGC CTGGCAGATC CCGGGTGGGG TGCTCGAACG CGGTGAGACC
CTGCACACCG GGCTGCGCCG TGAGGTCGAG GAGGAGACGG GTGCGGTCGT CGAACCCGTC
CGCCTGACCG GGGTGTACCT CAACATGCCC CTAGGCGTGG TTGCCATGGT GTTTCTCTGC
CACCATCCGA CCGGCGTCAT CGCTTCCGAC ACCGCGGAGG CGACGGAGGT CAGCTGGTTG
TCGATCGACG AGGTCCGTAC GCGGTTTGTG CCGGCTTTCG CAATCCGGGT GGCGGACGCG
GTGGCCGGAC GGCTCGAGCC GTTTATCCGC ACCCACGACG GGGTGTCCGT CCTTCCGTCC
GACGCAGCGG AATGA
 
Protein sequence
MHSVSVAGVT LNEKGLILCI RRRDIGAWQI PGGVLERGET LHTGLRREVE EETGAVVEPV 
RLTGVYLNMP LGVVAMVFLC HHPTGVIASD TAEATEVSWL SIDEVRTRFV PAFAIRVADA
VAGRLEPFIR THDGVSVLPS DAAE