Gene Francci3_3695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3695 
Symbol 
ID3903796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4431457 
End bp4432119 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID637881021 
Producthypothetical protein 
Protein accessionYP_482776 
Protein GI86742376 
COG category[L] Replication, recombination and repair 
COG ID[COG1637] Predicted nuclease of the RecB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.547538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTCG TCATCGCTCG CTGCAGCGTG GACTACGTCG GTCGGCTCAC CGCACATCTG 
CCGAGCGCCG TCCGGTTGGT ACTCGTCAAG GCGGACGGAT CCGTCTCCAT CCACGCCGAC
GGGCGAGCGT ACAAGCCGCT CAACTGGATG AGTCCCCCGT GCGTCATCGC CGAGGCGGAC
GGGGTCTGGC GGGTCACCAA CCGCGCGGCC GAGCAGCTCG TCATCACCCT CGAACAGGTG
CTGCACGATT CCACGCACGA CCTCGGCGTC GACCCGGGTC TGCGCAAGGA CGGGGTGGAG
GCGCATCTGC AGGTGCTGCT CGCCGACCGG CCCGACGCGA TCGCGCCCGG ACTCACCCTG
GTGCGCCGCG AGTACGAGAC CGGCATCGGG CCGGTCGACC TGCTGTGCCG CGACGCGGAC
GGCTCGACGG TCGCCGTCGA GATCAAACGC AGGGGTGAGA TCGACGGGGT GGAGCAGCTG
ACCCGTTACC TTGTCCGCCT GGAGGCCGAC CCGGCGTTGC CGCATCCCGT GCGCGGCATC
CTCGCGGCGC AGTCCATCAC CCCGCAGGCG CGGCTGCTGG CGGCGGACCG GGGGCTGGGC
TGCGCCGTCG TCGACTATGA CGAGCTGCGG GGCCTCGAAC CGTCCATTCC GACGCTTTTC
TGA
 
Protein sequence
MRLVIARCSV DYVGRLTAHL PSAVRLVLVK ADGSVSIHAD GRAYKPLNWM SPPCVIAEAD 
GVWRVTNRAA EQLVITLEQV LHDSTHDLGV DPGLRKDGVE AHLQVLLADR PDAIAPGLTL
VRREYETGIG PVDLLCRDAD GSTVAVEIKR RGEIDGVEQL TRYLVRLEAD PALPHPVRGI
LAAQSITPQA RLLAADRGLG CAVVDYDELR GLEPSIPTLF