| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3694 |
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| Symbol | |
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| ID | 3903795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4429370 |
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| End bp | 4431244 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881020 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_482775 |
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| Protein GI | 86742375 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.954648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGA GGCCCGTATC GGGAACCACA TCGGGAACGG GGCCGGCCGC GAACCAGGAG
AACGCGAACC AGGAGAAGAA GCCGGAGAAC AGCCGGGACG AGGCGGTGAG ACACCGCCGG
GTCGGGGTGG TGGGGCTCGG CACCATGGGC GCGGGCATCG CCGAGGTGCT GGCGAAGGCC
GGTCTGGAGG TCGTCGGCAT CGCGCGTGAC GCCGACGCGC TCGCCCGCAG CCGGGCCCGG
GTCGAGCACT CCCTCGACCG CGCGGGCCGC CACGGCAAGC TCGACGACGC GACCAGGGAG
GCCGTGCTGG CCCGCATGCG TCTCGGCACC GAGCTCGCGG CGGTCGCCGA CTGCGAGCTG
GTGATCGAGG CGATCGACGA ACGAATGAGC GCCAAACAGG CGCTTTTCGC CCGACTCGAC
GAGATCTGCC CCCCGGCCAC CGTCTTCCTG ACGAACACCA GCTCCCTGTC GGTAACGGAA
CTCGCGGCGG GCACCGCCCG CCCGGAACGG GTGCTCGGCA CCCACTGGTT CAATCCGGCG
CCGGTGATGC GCCTGGTGGA GGTCGTACGC ACGGTCGTCA CCGACCCGAC CGTGCTGGCC
GGGGTGATCG GCCTGGTCAA CGACGTGGGG AAGACCGCGG TCGTCGCGGA GGACCGGGCG
GGCTTCATCG TCAACGCGCT GCTGTTCGGT TATCTCAACA ACGCCGTGCG CATGCTCGAG
GCCCGGTATG CGGCCCGGGA GGACATTGAC GCGGCCATGC GGCTCGGGTG CGGGCATCCG
ATGGGCCCGC TCGCCCTGCT CGATCTGATC GGTCTGGACG CCGCCCACGA GATTCTCAAC
TCGATGTACC GGCAGTCCCG TGACCACCTG CACGCTCCGG CACCGCTGCT GAGCCAGCTC
GTGCGCGCGG GCCTGCTCGG CCGCAAGACC GGTCGTGGTT TCTACACCTA CGCGGCACCG
GACTCCTCCG AGGTGGTCGA CGCGGTCGAT CCGCTCGCCG ACCGCCTGGG GCGGGGCCGC
CCGGTGCGCT CGGTCGGCGT CGTGGGGAGC GGCACGATGG CGGGTGGCAT CGCGGAGGTG
CTGGCCCGGT CCGGGCACGA CGTCCTCCTG CGGGCCCGGA GCGAGCGCAC CCTCGCCGCC
ACCCTCGCGA AGATCGAGTC GTCGTTGGCG GCGTCGGTGG CCAGGGGGCG GCTGTCCGAC
GCCGACCGGC TGGCGGCTCT GGCCCGGGTG CGCGGCACGA CCGATCTGGG TGAGCTCGGC
CACTGCGAGC TGCTGCTTGA GGCGGTGGTG GAGGACCTGG CGGTGAAGCG GGAGCTGTTC
GCCGACCTGG ACAAGATCGC GGCGCCCGGC GCCGTGCTGG CGACCACCAC GTCCTCGTTG
CCGGTCATCG AGTGCGCCAT GGCCACCAGC CGGCCGCGGG ACGTCATCGG TATGCACTGG
TTCAACCCGG CCCCGGCGAT GAAGCTGATC GAGGTGGTGC CCACGGTTCT CACCGGCGAC
GACGTGACAG CCACGGTCCT GGCGCTGTCC CGAGCGGCCG GGCGGCATCC GGTGCTCTGC
GCCGACCGGG CGGGGTTCAT CGTCAACGCG CTGCTGTTTC CCTATCTCAA CGACGCAGTG
AAGATGCTCC AGGCGCACTA TGCGACGATC GAGGACGTTG ACACGGCGAT GACGGTCGGT
TGCGGCCATC CGCTGGGCCC CTTCGCGCTC GCCGACGTCG TCGGCCTCGA TGTCACGCTC
GCGATCACGC GCTCGTTGTA CGCGCAGTTC CGCGAGCCCG GCTACGCCCC GGCACCCCTG
CTCGAACAGC TGGTCCGGGC TGGGTTCCTG GGACGCAAGA CCGGCCGGGG GTTCCTCGAC
CACCCGCCGC GCTGA
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| Protein sequence | MIERPVSGTT SGTGPAANQE NANQEKKPEN SRDEAVRHRR VGVVGLGTMG AGIAEVLAKA
GLEVVGIARD ADALARSRAR VEHSLDRAGR HGKLDDATRE AVLARMRLGT ELAAVADCEL
VIEAIDERMS AKQALFARLD EICPPATVFL TNTSSLSVTE LAAGTARPER VLGTHWFNPA
PVMRLVEVVR TVVTDPTVLA GVIGLVNDVG KTAVVAEDRA GFIVNALLFG YLNNAVRMLE
ARYAAREDID AAMRLGCGHP MGPLALLDLI GLDAAHEILN SMYRQSRDHL HAPAPLLSQL
VRAGLLGRKT GRGFYTYAAP DSSEVVDAVD PLADRLGRGR PVRSVGVVGS GTMAGGIAEV
LARSGHDVLL RARSERTLAA TLAKIESSLA ASVARGRLSD ADRLAALARV RGTTDLGELG
HCELLLEAVV EDLAVKRELF ADLDKIAAPG AVLATTTSSL PVIECAMATS RPRDVIGMHW
FNPAPAMKLI EVVPTVLTGD DVTATVLALS RAAGRHPVLC ADRAGFIVNA LLFPYLNDAV
KMLQAHYATI EDVDTAMTVG CGHPLGPFAL ADVVGLDVTL AITRSLYAQF REPGYAPAPL
LEQLVRAGFL GRKTGRGFLD HPPR
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