| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3665 |
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| Symbol | |
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| ID | 3905349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4388926 |
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| End bp | 4391418 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880991 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_482746 |
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| Protein GI | 86742346 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACCA CCGTCTCACC GGACATAGCG GCATCCCCGG GCGTACCGGC GCCGACCGCC
TCCGGGCTCG CGCCGGGGTG CGCGGTGCCA CTGGGCGTGA CCTGGGACGG GTCCGGGGTG
AACATCGCCG TCGTCGCCCC CGGGGCCGAG GCGGTCGACT TCTGCCTGTT CGATGCCGAC
GGCCGCGAGA CACGCCATCG ACTTCCGGAG CGTGACGGCG GGGTGTGGCA CGGCTATCTG
GCTGGCGTCC GCCCCGGTCA GCGTTACGGC CTGCGGGCAC ACGGTCCCTA TGACCCGGAG
CGGGGCCAGC GGTACAACCC GGCGAAGCTG CTGGTCGACC CCTACACCCG ATCGGTAGCC
GGGACGCTGC GCACGGACCC GGCGATCTAC GGGTTCGGTG GCGGCGACCC CTACGGCTTC
GAACCGGACC CGCGGGACTC CGCACCTTTC GTGCCCCGCT GCGTCGTGAC CGGGCCCGGG
CGGGCGCAGC GGGGCTCCGC CGGGACCAGG GAGTCCGGAT TCGGGGACCC CGGGATCGGG
GACCCCGGAT CCGGGAGTGG CGGTTTGACG GGTCACGGCG TACACCCGGC GGACAACCGG
CCCACCATCC CCTGGTCGGA CACGATCATC TACGAGGCGC ACGTACGCGG GCTCACGAAA
CGTCACCCGG ACCTGCCGCC ACGGTTACGC GGGACATACG CCGGGCTCGG CCACCCGAGC
GTCCTGGCGC ACCTGCGCCG GCTCGGCGTC ACCGCGATCG AACTGCTGCC GGTGCACACC
TCGGTCTCCG AACCGGCCCT GCTCGAGCGC GGAAAAATCA ACTACTGGGC TTACAACACC
CTGGCCTTCT TCGCCCCTCA TGCCGGGTAC GCGGCCACTG ACGATCCGAT CGGCGAATTC
CAGGCGATGG TCGCAGCCCT GCACGCCGTC GGCATTGAGG TGATACTCGA CGTCGTCTAC
AACCACAGCG CCGAGGGCAG CGAGCGGGGC CCGACGCTGT CCCTGCGTGG CCTGGACAAC
ACGACCTATT ACCGGGTAGA GCCGATGGAT CCCCGGCGCT ACCGTGACGT GACCGGCTGC
GGCAACACCC TCAACACGTC CTCACCGCAC GTCGTGCGGC TGATCTGCGA CTCGCTGCGG
TACTGGGTGA CGGAGATGGG CGTCGACGGG TTCCGGTTCG ATCTCGCCAC CGCGCTCGCC
CGCAATCCCG ACGCCTTCGA CCCCGCGGCA AGCCTGCTGA CCGCCATCCA CGCCGACCCG
ATCCTCGCCA CGGTGAAGCT GATCGCCGAG CCGTGGGACG TCGGCTGGGG CGGATACCAG
GTGGGGGGGT TCCCGGCACC CTGGGCGGAG TGGAACGGGC GGTTCCGTGA CACCGTGCGC
GACGTGTGGA ACAGGTACAC CAGCGGCGTC GCCGATCTGG GCTATCGGGT GTCCGGCTCG
TCGGACCTGT TCGAGCACGG CGGCCGACGC CCCTGGGCAT CGATCAACTT CGTCACCGCC
CACGACGGCT TTCCCCTGGC CGATCTGGTC TCCTACAACG AGAAGCACAA CGAGGACAAC
GGCGAGGGCA ACCGGGACGG CGAGGCGGAC AACCGCTCGG CGAACCACGG GATGGAGGGT
GCGACCGACG ACCCGGCGAT CCTGGCCATC CGCCGCCGGG TGCGCCGGGG ACTGATCACG
ACGCTGCTGC TGTCCACGGG CGTCCCGATG CTGCTCGCCG GCGACGAGTT CGGTCGCTCG
CAGGGCGGCA ACAACAACGC CTACTGCCAG GACAACGCGG TGTCCTGGCT CGACTGGCCG
ACCGACCTCG TGGGACCGGA GGACGTCACC GGACCGGAAG GCGTCACCGG ACCGGAAGGC
GTCACCGGAC CGGAGGACGT CACCGGACCG GAAGGCGTCA CCGGACCGGA GGACGTCGCG
GAGCCGGACC ACGCCTACCC CGACCCGGCC GGCCCCGACC CGGCGCTGTG TCGGCTGGTG
GGCGGGTTGG CGGCACTGCG TTCCGCCGAA CCCGTGCTGC GCCGCGGGCG GTTCTTCCAC
GGCGGCCAGT CGGCACCCGG GCGACTCGCG GACATCACCT GGTTCCGTGC GGACGGGGCG
GTGATGTCGG TGGCGGACTG GAACGCCCCG CAGGTCGAGA CGCTCGTGGC CCATGTCGCC
GGCAGCCCCG TCGCCGGCAG CCCCGTCGAT GAGGATCCTG CCGGCGGGCG GGGAACGCAC
GATCTACCGG CCCACGGCGC TGGCCTGGTG TACGTGTTCC ACCCGGATCG CGGCGACACC
GTCGTCACCC TGCCCGGTGC TCCCTGGGCG GCCCGCCACG ACCTGCTGCT CAATACCGCC
GACGACGATC TTGCCGGATT CCCGGCGACC GTCGCGGTAC CGGGAACCAG CTACGTCGGC
GGCGAGTCCC TGACCGTGCT GGGCCACAGC GTGCTCGTCC TACGAGCCCA TCCCCCCGGC
ACGGCGGCTT CCCCGCGGTG TGGGGACCCC TAA
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| Protein sequence | MKTTVSPDIA ASPGVPAPTA SGLAPGCAVP LGVTWDGSGV NIAVVAPGAE AVDFCLFDAD
GRETRHRLPE RDGGVWHGYL AGVRPGQRYG LRAHGPYDPE RGQRYNPAKL LVDPYTRSVA
GTLRTDPAIY GFGGGDPYGF EPDPRDSAPF VPRCVVTGPG RAQRGSAGTR ESGFGDPGIG
DPGSGSGGLT GHGVHPADNR PTIPWSDTII YEAHVRGLTK RHPDLPPRLR GTYAGLGHPS
VLAHLRRLGV TAIELLPVHT SVSEPALLER GKINYWAYNT LAFFAPHAGY AATDDPIGEF
QAMVAALHAV GIEVILDVVY NHSAEGSERG PTLSLRGLDN TTYYRVEPMD PRRYRDVTGC
GNTLNTSSPH VVRLICDSLR YWVTEMGVDG FRFDLATALA RNPDAFDPAA SLLTAIHADP
ILATVKLIAE PWDVGWGGYQ VGGFPAPWAE WNGRFRDTVR DVWNRYTSGV ADLGYRVSGS
SDLFEHGGRR PWASINFVTA HDGFPLADLV SYNEKHNEDN GEGNRDGEAD NRSANHGMEG
ATDDPAILAI RRRVRRGLIT TLLLSTGVPM LLAGDEFGRS QGGNNNAYCQ DNAVSWLDWP
TDLVGPEDVT GPEGVTGPEG VTGPEDVTGP EGVTGPEDVA EPDHAYPDPA GPDPALCRLV
GGLAALRSAE PVLRRGRFFH GGQSAPGRLA DITWFRADGA VMSVADWNAP QVETLVAHVA
GSPVAGSPVD EDPAGGRGTH DLPAHGAGLV YVFHPDRGDT VVTLPGAPWA ARHDLLLNTA
DDDLAGFPAT VAVPGTSYVG GESLTVLGHS VLVLRAHPPG TAASPRCGDP
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