Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3662 |
Symbol | |
ID | 3905346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4383052 |
End bp | 4383828 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880988 |
Product | short chain enoyl-CoA hydratase |
Protein accession | YP_482743 |
Protein GI | 86742343 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.745999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGTGG TGCGGCTCGA GGTTGACGGC GGGATCGGCA CCATCCGGTT AGACCGGCCG CCGATGAACG CGCTGGACTC CACGGTCGCC GCGGAGCTGC GGACCGCCGC GGTCGAGGCG ACCCGGCGGT CGGACGTCCG CGCGGTGGTG CTCTATGGCG GGGAAAAGGT GTTCGCCGCC GGGGCCGACA TCCGGCAGAT GGCGCCGATG GGTTACGCCG AGGTATCCAC CTGGGTGGGC GATCTGAACT CCACCTTCGA GGTCGTGGCC CGGATCCCGA AGCCCGTGGT CGCCGCGGTG ACGGGCTATG CCCTGGGCGG CGGGTTGGAG CTTGCCCTGT GCGCGGACGT GCGGGTCTTG GCCGAGGACG CCCGGGTCGG CCAGCCCGAG ATCCTGCTCG GAGTGATCCC CGGCGCGGGG GGCACCCAGC GGCTGCCGCG CCTGATCGGC CCGTCCCGCG CCAAGGACCT CATCTTCAGC GGCCGGCAGG TCCGGGCGGC CGAGGCAGCG GAGATCGGTC TGGCCGACGC CGTCGTTCCC GCGGGTGAGG TGTACGTGCA GGCGAAGCGG ATCGCGGGCC GGTACACGAA CGGCCCGGCG ATGGCGCTCG CGGCGGCGAA GCAGGCGGTT GACGACGGCG CGGAGATCGC GTTGGCCGAG GCGCTACGTC TGGAGGCGGC GCTGTTCGCC GGGCTGTTCG CCACCGAGGA CCGGCGGATC GGAATGGAGT CCTTCCTCGA GAGCGGGCCC GGCAAGGCCG ACTTCATCGG CCGCTGA
|
Protein sequence | MSVVRLEVDG GIGTIRLDRP PMNALDSTVA AELRTAAVEA TRRSDVRAVV LYGGEKVFAA GADIRQMAPM GYAEVSTWVG DLNSTFEVVA RIPKPVVAAV TGYALGGGLE LALCADVRVL AEDARVGQPE ILLGVIPGAG GTQRLPRLIG PSRAKDLIFS GRQVRAAEAA EIGLADAVVP AGEVYVQAKR IAGRYTNGPA MALAAAKQAV DDGAEIALAE ALRLEAALFA GLFATEDRRI GMESFLESGP GKADFIGR
|
| |