Gene Francci3_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3653 
Symbol 
ID3905337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4371952 
End bp4373076 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content73% 
IMG OID637880979 
Productglucokinase 
Protein accessionYP_482734 
Protein GI86742334 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGT CGCAGGAGGC GTTCCAGCCA TGGGAGGCGG GCGGGCCGCG GGACGTCCGC 
GCGTCGGGCA AGGAGCCCGC GGGTGCGGAG CCGGCGCGTG CGGACGGCCG GAAGACCTTC
GCACTCGCCC TCGACATCGG GGGAACCAAG ATCGCCGCCG GTGTCGTCGC GGGGGACGGC
ACGATCGCCG CTCAGGCCCG TCGCTCCATG CCGGTCCCGC GTCCGGCTTC ACCGGCTTCA
CCTGATCCGG ACGGCGCTGG GCCGGCGTCG GCCCGGGCGG CAGGGGTCGA TGCCGAGGAG
GTCTTCGCCG TCGTCCAGGA CTGCCTCGAC GAGGCGCTCG CCGCGGCGCG GATGCGTCCG
GACGAGATGA CGGGACTCGG CTGCGGGTGC AGCGGTCCGA TGGACTGGCC GGTCGGTGAG
GTCTCCCCGT TGAACATTCC GGCCTGGCGG GGATTCCCGT TGCGGGCGCG GCTGCGGGAC
GCATACCCGG GCGGCCCGGT TTTGATCCAC AACGACGCCG TCGCCCTCGC CGCCGGCGAG
CACTGGATGG GTGAGGGCCG TGGCGTGCGC AACATGCTCG CCGTCACCGT CTCCACCGGC
GTCGGAGGCG GCCTGGTTCT CGGGGGCCGG TTGCTGCACG GCACATCCGG CAATGCCGGC
CATATCGGTC ACATGGTGGT GGAGGCCGAC GGACCTCCTT GTCCGTGTGG GGGACGTGGA
TGTCTGGAGG CGCTCGCGTC GGGTCCGCGG ACGGTGGCCT GGGCGATCGG CGAGGGCTGG
GTGCCTTCGG GGGATCAGCC GGCCAACGGT CGCGTGCTTG CAGCCTCGGC ACGGGCCGGC
GACGGCGTCG CCCGGCGGGC CCTCGCCCGC GCGGGTGCTG CGGTGGGAGC CGGACTGGCC
TCCTGCGCGA GCCTGCTCGA CCTGGAGGCC GCCGTGGTGG CTGGCGGGTT TGCGCAGTCC
GGCCCGATCT TCTGGGACGC GCTGTCGGCC AGTTTCGATC GTCACACGGG GTTGGCGTTC
ACCCGGCGGA TGCAGATCAG ACGGAGCTCC GATCCCAGCC GGATCGCGCT TCGGGGGGCC
GGCGCCTTCA TCCTCGCGCC GGAGCGGTAC GCCTGGGAGG GCTAG
 
Protein sequence
MSQSQEAFQP WEAGGPRDVR ASGKEPAGAE PARADGRKTF ALALDIGGTK IAAGVVAGDG 
TIAAQARRSM PVPRPASPAS PDPDGAGPAS ARAAGVDAEE VFAVVQDCLD EALAAARMRP
DEMTGLGCGC SGPMDWPVGE VSPLNIPAWR GFPLRARLRD AYPGGPVLIH NDAVALAAGE
HWMGEGRGVR NMLAVTVSTG VGGGLVLGGR LLHGTSGNAG HIGHMVVEAD GPPCPCGGRG
CLEALASGPR TVAWAIGEGW VPSGDQPANG RVLAASARAG DGVARRALAR AGAAVGAGLA
SCASLLDLEA AVVAGGFAQS GPIFWDALSA SFDRHTGLAF TRRMQIRRSS DPSRIALRGA
GAFILAPERY AWEG