Gene Francci3_3644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3644 
SymbolgatA 
ID3905325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4352846 
End bp4354372 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content73% 
IMG OID637880967 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_482725 
Protein GI86742325 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGA ACATGACGGA GAACCCGACA CCTCCCGGCA CGACTGACGT CGTGCGCCTG 
TCCGCCGCCG CGACGGCGGC CGCGATCGCC GTCGGCAGGC TGAGTGCCGT CGAGGCGACC
CGGGCGGCGT TGGACCGCAT CGCCAAGGTC GACGAGACCG TCCACGCCTT CCTGCACGTG
GACGCCGACG GCGCGCTCGC CGCGGCCCGG TCGGTCGACG ACCGGCGCGC GGCCGGGGAG
CGCCTCGGGC CGCTCGCCGG GGTGCCGTTG GCGCTCAAGG ACGTCTTCAC CACCCGAGGG
ATGCCCACCA CCTGCGGCAG CCGCATCCTC GAGGGCTGGC ACCCCCCGTA CGACGCCACG
GTGGTGAGCC GGCTGCGGGC CGCGGACGTC GTCCTGCTGG GTAAGGCCAA CATGGACGAG
TTCGCCATGG GCTCGTCGAC CGAGAACTCG GCGTTCGGGC CGACCCGCAA CCCCTGGGAC
GTCACCCGCA TCCCCGGCGG CAGCAGCGGC GGCAGCGCCG CGGCCGTCGC CGCCTTCGAG
GCGCCGCTTG CCCTCGGCAC CGACACGGGC GGTTCCATCC GTCAGCCGGC CGCCCTCTGC
GGTCTGGTCG GGGTCAAGCC CACCTACGGC GGGGTCAGCC GCTACGGGCT GGTCGCCTTC
TCCAGCTCGC TGGACCAGGC CGGCCCGCTG GCCCGCACGG TGACCGACGC GGCGTTGCTG
CACGCCGCGA TCGCCGGCCA CGATCCCCTG GACTCCACGA GCGTCGACGC GCCGGTTCCC
GCGGTCGTGG CGGCGGCACG GCAGCGCGAC ATCCGCGGTA TGCGGGTCGG TGTGGTCCGC
GAGTTCGCCG GCGACGGATA CGACCCGGGG GTCGAGGCCG CCTTCGCCGC CGCGGTCGAG
GCGCTGACGG GCCTGGGCGC CCAGGTCGTC GAGGTGAGCT GCCCGCACTT CAGCTACGCG
CTGCCCGCCT ATTACCTGAT CGCGCCCAGC GAGTGCTCGT CGAACCTGGC TCGCTTCGAC
GCGATGCGCT TCGGGCTGCG GATCGGCGAC GACGGTCGGG CCGGGGCCGA GGAGGTCATG
AGCCGCACCC GCGAAGCCGG CTTCGGCCCG GAGGTGAAGC GGCGGATCAT CCTGGGCACC
TATGCCCTGT CCTCGGGGTA CTACGACGCC TACTATGGCC AGGCGCAGAA GGTCCGTACG
CTGATCAGCC GCGACTTCAC CGCCGCGTTC GAGCAGGTCG ACGTCCTGGT CTCGCCCACC
ACCCCGACAC CGGCCTTCCC GCTGGGCGCG AAGGTCGACG ATCCGGTGGC CATGTACCTG
TCGGACCTGT GCACGATCCC GTCCAACCTC GCGGGCGGCC CGGCGATGAG CCTGCCGTCC
GGGCTCGTGG ACGGGCTGCC GGTGGGTATC CAGATCATGG CGCCGCCGTT CGCCGATGAC
CGGCTCTACC GGGTCGGCGG GGCGCTGGAG GAGGCGTTGG ACGTCGGACG CGGCCATCCG
CTGCTCGACG AGGTCCCGGC GCTGTGA
 
Protein sequence
MTENMTENPT PPGTTDVVRL SAAATAAAIA VGRLSAVEAT RAALDRIAKV DETVHAFLHV 
DADGALAAAR SVDDRRAAGE RLGPLAGVPL ALKDVFTTRG MPTTCGSRIL EGWHPPYDAT
VVSRLRAADV VLLGKANMDE FAMGSSTENS AFGPTRNPWD VTRIPGGSSG GSAAAVAAFE
APLALGTDTG GSIRQPAALC GLVGVKPTYG GVSRYGLVAF SSSLDQAGPL ARTVTDAALL
HAAIAGHDPL DSTSVDAPVP AVVAAARQRD IRGMRVGVVR EFAGDGYDPG VEAAFAAAVE
ALTGLGAQVV EVSCPHFSYA LPAYYLIAPS ECSSNLARFD AMRFGLRIGD DGRAGAEEVM
SRTREAGFGP EVKRRIILGT YALSSGYYDA YYGQAQKVRT LISRDFTAAF EQVDVLVSPT
TPTPAFPLGA KVDDPVAMYL SDLCTIPSNL AGGPAMSLPS GLVDGLPVGI QIMAPPFADD
RLYRVGGALE EALDVGRGHP LLDEVPAL