| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3642 |
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| Symbol | gatB |
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| ID | 3905323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4351027 |
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| End bp | 4352544 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880965 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_482723 |
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| Protein GI | 86742323 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACAG TGGCTCCCGC CGGCGCGCTG CCGTCCTACT CCGACGTTCT GGCCCGCTAC
GAGCCGGTGA TCGGATTGGA GACGCACGTC GAACTCGGCA CCGCTTCCAA GATGTTCTGC
GGCTGCGCGA CGGCCTTCGG TGCCGAGCCC AACACGCAGG TCTGCCCGGT GTGCCTCGGG
CTGCCGGGTT CCCTGCCGGT GGTGAACGAG GCGGCGGTGC GCTTCGCGGT CATGATCGGA
CTCGCGTTGC ACTGTGAGAT CGCGTCGTGG TGCCGGTTCG CGCGCAAGAA CTACTTCTAT
CCCGACATGC CGAAGAACTT CCAGATCAGC CAGTACGACG AGCCGCTGTG CACGAACGGC
TGGCTCGACG TGGAGGTCGA GGGCGAGGTG CACCGGGTGG GCATCACCCG GGTGCACATG
GAGGAGGACA CCGGCAAGTC GCTGCACGTC GGCGGCGCCA CCGGCCGCAT CCACGGCGCC
ACCCACTCGC TGGTCGACTA CAACCGGGCC GGCATCCCGC TCGTGGAGAT CGTGACTGAA
CCGGACGTGC GTTCCCCCGA GGTGGCCCGG GCCTACGTGG ACGAGTTGCG GGAGCTGATC
CGGGCGCTCG GGGTCTCCGA CGTCCGGATG GAGCAGGGAT CGCTGCGCTG CGACGCCAAC
GTCTCGCTGC GCCCGCGGCC GGCGCCCGGC GACCCGGACG CTCCCTTCGG CACCCGCAGC
GAGACGAAGA ACCTCAACTC GCTGCGGTCG GTGGAACGCG CGGTGCGTTA CGAGACCACC
CGGCAGGCCG CGTTGCTCGA CGACGGCCAG CGCATCATCC AGGAGACCCG CCACTTCGAC
GAGGCGTCGG GCCGCACCTC GTCGGGTCGC TCCAAGGAGG AGGCCACCGA CTACCGGTAC
TTCCCGGAGC CTGACCTCAC CCCGTTGGCC CTGCCCGCGG AATACGTCGA GCGGCTGCGG
GCCGGCCTGC CGGAGTTGCC CGCGGCGCGC CGGGCCCGGC TGATCGCCGA GCACGGCTAC
ACCGCGCGGG ACCTGCAGGA CCTGCGCAAT GCCGCGGTCC TCGACCTGGT CGAGGAGACC
ATCGCCGCCG GCGCGGCCCC GGCGACCGCC CGCAAGTGGT GGCTCAACGA GCTGGCCAGG
CGCGCCTCGG ACGCCGGTCT CCAGCCTCGC GATCTTAAGA TCACCCCGAC CGACGTCGCC
CGGATCACCG CGCTGGTGGC CGCGGGCGAG CTCACCGACG CGCTGGCCCG CAAGGTCATC
GACGGGGTGC TCGCCGGTGA GGGCACGCCC GACGAGGTGA TCGCCGGCCG TGGGCTGGCG
ATCGTCGCGG ACGACAGCGC GCTCACCGCG GCCGTCGACG CGGCGCTCCT CGGTGCCCCC
GACATCGCCG AGAAGGTCCG CGGTGGCAAG GTGAACGCCG TCGGTCCGCT GGTGGGCGCG
GTGATGAAGG CGATGAAGGG CCAGGCGGAC GCGGCGGCCG TGCGGCGACT GCTGCTGGAG
CGCCTCGGCG TCTCCTGA
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| Protein sequence | MSTVAPAGAL PSYSDVLARY EPVIGLETHV ELGTASKMFC GCATAFGAEP NTQVCPVCLG
LPGSLPVVNE AAVRFAVMIG LALHCEIASW CRFARKNYFY PDMPKNFQIS QYDEPLCTNG
WLDVEVEGEV HRVGITRVHM EEDTGKSLHV GGATGRIHGA THSLVDYNRA GIPLVEIVTE
PDVRSPEVAR AYVDELRELI RALGVSDVRM EQGSLRCDAN VSLRPRPAPG DPDAPFGTRS
ETKNLNSLRS VERAVRYETT RQAALLDDGQ RIIQETRHFD EASGRTSSGR SKEEATDYRY
FPEPDLTPLA LPAEYVERLR AGLPELPAAR RARLIAEHGY TARDLQDLRN AAVLDLVEET
IAAGAAPATA RKWWLNELAR RASDAGLQPR DLKITPTDVA RITALVAAGE LTDALARKVI
DGVLAGEGTP DEVIAGRGLA IVADDSALTA AVDAALLGAP DIAEKVRGGK VNAVGPLVGA
VMKAMKGQAD AAAVRRLLLE RLGVS
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