Gene Francci3_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3641 
Symbol 
ID3905322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4349029 
End bp4350720 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content73% 
IMG OID637880964 
Productpenicillin-binding protein, transpeptidase 
Protein accessionYP_482722 
Protein GI86742322 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCTTA CACCTTCCGG CTTCACCGCG TCAACCTCCC GCCGTCGGGG TCGGGGCCGC 
CGGACGGCGA TCATCGTCGC GGTCGTCGTC GTCCTGCTGG CCGTCGCCGG CGGCGTCGGC
TACGTCCTGA ACAACCGCGC CGCCGACCGC GCCGCCGACC GGAAGGTCCA GGCTGCGGCC
GACTCCTACC TGGCCGGCTG GCGGACGCTG ACGACTTCCG GTGGGACGGC GACCCCCGGC
TCCGCGGCTG TCGCCGCCGT CTCCACGCCC GGGAGCATCG ACGTCGCGCG CCTGGTGGGC
ACGATGGCCG AGGTGCGTGA CCGCCTGCTC GTCACAGCGG CTACGTTTAC CCCGGGCGCG
ATCAGCCGCA GCGGCGAGAC GGCGACCGTG CCGTACCTGG CCAGGCTCAC GCTCTCTGGT
CTGCCGACGC CGCTGGAGTA CACCGGGGCG CTGCATCTCG TCTCGACCGG CGGCGGGTGG
CGGGTGAAGG CTGATCCGGT CTCGGTGCAT CCGGCCCTGC GCCCAGGGCT GCACCTGGAC
CGGACCGCCT CCACCGGTAA GCGGGGGGAC CTGCTCGACG TGGCGGGCCA GCCCCTACGG
GACTCCTCCG ACCTGGCGGG CAACCTCGTC GGTCGGACGG CGCCGCTGTC CGGGTTGCAG
CGGGTGTACG ACGACCGGCT GCGGGCGCAG GGCGGCGCGG TCGTCGTGCG GGATGCGAAG
AACGCGACCG TGCAGACGCT GCACACCTAT CCGATGACCG ACGGCGAGGC GATCCGTACC
ACGATCGACC TGCGGGTCCA GCAGGCCGCC GAGGCGGCCC TGGCCACCGC GGCCCGCCCG
ACCGGGGCGA TGGTCGCGAT CGACACTCGT ACCGGCGCCA TCCTGGCCCT GGCCAACCAT
CCGCCCAGCG GGTCGAGCCG GGCTGTCCGG GGCAAGTACC CACCGGGTTC CACCTTCAAG
ATCGTGACGG CCACCGCCGC GCTGATGAAC GGCAAGGCGC CGGACATGCC CCTGGACTGC
ACCCAGACGG TCAGCGTCGG CGGTCGGACC TTCCAGAACG CCGAGTCCGA GCAGTTCGGC
CCCATCCCGC TGCGGACCGC GTTCGCCAGG AGCTGCAACA CCGCGTTCAT CCGGCTGGAG
GAGTCACTCC CGGACGGCGC GCTGGAGAAG GCCGCCCAGC TTTACGGCTT CGACGGCCGA
CCACCGCTGG ATATCGCCAG CGTCGGGGGG ACCTTCCCGA CCCCGCGTGA CGCGGTCGAG
TCGGCGTCGG CGTCGATCGG CCAGGCCCGC ATCGAGGTCT CCCCGCTGCA GATGGCGAGC
GTCGCCGCGG CGGTCGCGAG CGGTACCTGG CACCAGCCGT TCGTCGTCGG CCAGTCGGCG
CGCAGCAACC CCATCCCGCC CGTGGTGCTG CCCCCGCTGC GGGACTTCAT GCGGGCGGTC
GTCACCGAGG GCACCGCCGC GAAGGTCCCG ATGCCCGGCG AGGTCTTCGG GAAGACCGGC
ACCGCCGAGT ACAAGGACGG CAACCCGCCG CCGACCCATG CGTGGTTCGT CGGCTACCGG
GGCGACGTGG CCTTCGCGGT GGTCGTCGAG GACGGCGGCT TCGGCGCGGA GACGGCCGCG
CCGGTCGCGG CCAGGTTCCT CACCGCGTTG GACGGTGGCC AGATCGGTGC GCCCGGCTCC
GGCGGGCAAT GA
 
Protein sequence
MPLTPSGFTA STSRRRGRGR RTAIIVAVVV VLLAVAGGVG YVLNNRAADR AADRKVQAAA 
DSYLAGWRTL TTSGGTATPG SAAVAAVSTP GSIDVARLVG TMAEVRDRLL VTAATFTPGA
ISRSGETATV PYLARLTLSG LPTPLEYTGA LHLVSTGGGW RVKADPVSVH PALRPGLHLD
RTASTGKRGD LLDVAGQPLR DSSDLAGNLV GRTAPLSGLQ RVYDDRLRAQ GGAVVVRDAK
NATVQTLHTY PMTDGEAIRT TIDLRVQQAA EAALATAARP TGAMVAIDTR TGAILALANH
PPSGSSRAVR GKYPPGSTFK IVTATAALMN GKAPDMPLDC TQTVSVGGRT FQNAESEQFG
PIPLRTAFAR SCNTAFIRLE ESLPDGALEK AAQLYGFDGR PPLDIASVGG TFPTPRDAVE
SASASIGQAR IEVSPLQMAS VAAAVASGTW HQPFVVGQSA RSNPIPPVVL PPLRDFMRAV
VTEGTAAKVP MPGEVFGKTG TAEYKDGNPP PTHAWFVGYR GDVAFAVVVE DGGFGAETAA
PVAARFLTAL DGGQIGAPGS GGQ