Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3641 |
Symbol | |
ID | 3905322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4349029 |
End bp | 4350720 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637880964 |
Product | penicillin-binding protein, transpeptidase |
Protein accession | YP_482722 |
Protein GI | 86742322 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCTTA CACCTTCCGG CTTCACCGCG TCAACCTCCC GCCGTCGGGG TCGGGGCCGC CGGACGGCGA TCATCGTCGC GGTCGTCGTC GTCCTGCTGG CCGTCGCCGG CGGCGTCGGC TACGTCCTGA ACAACCGCGC CGCCGACCGC GCCGCCGACC GGAAGGTCCA GGCTGCGGCC GACTCCTACC TGGCCGGCTG GCGGACGCTG ACGACTTCCG GTGGGACGGC GACCCCCGGC TCCGCGGCTG TCGCCGCCGT CTCCACGCCC GGGAGCATCG ACGTCGCGCG CCTGGTGGGC ACGATGGCCG AGGTGCGTGA CCGCCTGCTC GTCACAGCGG CTACGTTTAC CCCGGGCGCG ATCAGCCGCA GCGGCGAGAC GGCGACCGTG CCGTACCTGG CCAGGCTCAC GCTCTCTGGT CTGCCGACGC CGCTGGAGTA CACCGGGGCG CTGCATCTCG TCTCGACCGG CGGCGGGTGG CGGGTGAAGG CTGATCCGGT CTCGGTGCAT CCGGCCCTGC GCCCAGGGCT GCACCTGGAC CGGACCGCCT CCACCGGTAA GCGGGGGGAC CTGCTCGACG TGGCGGGCCA GCCCCTACGG GACTCCTCCG ACCTGGCGGG CAACCTCGTC GGTCGGACGG CGCCGCTGTC CGGGTTGCAG CGGGTGTACG ACGACCGGCT GCGGGCGCAG GGCGGCGCGG TCGTCGTGCG GGATGCGAAG AACGCGACCG TGCAGACGCT GCACACCTAT CCGATGACCG ACGGCGAGGC GATCCGTACC ACGATCGACC TGCGGGTCCA GCAGGCCGCC GAGGCGGCCC TGGCCACCGC GGCCCGCCCG ACCGGGGCGA TGGTCGCGAT CGACACTCGT ACCGGCGCCA TCCTGGCCCT GGCCAACCAT CCGCCCAGCG GGTCGAGCCG GGCTGTCCGG GGCAAGTACC CACCGGGTTC CACCTTCAAG ATCGTGACGG CCACCGCCGC GCTGATGAAC GGCAAGGCGC CGGACATGCC CCTGGACTGC ACCCAGACGG TCAGCGTCGG CGGTCGGACC TTCCAGAACG CCGAGTCCGA GCAGTTCGGC CCCATCCCGC TGCGGACCGC GTTCGCCAGG AGCTGCAACA CCGCGTTCAT CCGGCTGGAG GAGTCACTCC CGGACGGCGC GCTGGAGAAG GCCGCCCAGC TTTACGGCTT CGACGGCCGA CCACCGCTGG ATATCGCCAG CGTCGGGGGG ACCTTCCCGA CCCCGCGTGA CGCGGTCGAG TCGGCGTCGG CGTCGATCGG CCAGGCCCGC ATCGAGGTCT CCCCGCTGCA GATGGCGAGC GTCGCCGCGG CGGTCGCGAG CGGTACCTGG CACCAGCCGT TCGTCGTCGG CCAGTCGGCG CGCAGCAACC CCATCCCGCC CGTGGTGCTG CCCCCGCTGC GGGACTTCAT GCGGGCGGTC GTCACCGAGG GCACCGCCGC GAAGGTCCCG ATGCCCGGCG AGGTCTTCGG GAAGACCGGC ACCGCCGAGT ACAAGGACGG CAACCCGCCG CCGACCCATG CGTGGTTCGT CGGCTACCGG GGCGACGTGG CCTTCGCGGT GGTCGTCGAG GACGGCGGCT TCGGCGCGGA GACGGCCGCG CCGGTCGCGG CCAGGTTCCT CACCGCGTTG GACGGTGGCC AGATCGGTGC GCCCGGCTCC GGCGGGCAAT GA
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Protein sequence | MPLTPSGFTA STSRRRGRGR RTAIIVAVVV VLLAVAGGVG YVLNNRAADR AADRKVQAAA DSYLAGWRTL TTSGGTATPG SAAVAAVSTP GSIDVARLVG TMAEVRDRLL VTAATFTPGA ISRSGETATV PYLARLTLSG LPTPLEYTGA LHLVSTGGGW RVKADPVSVH PALRPGLHLD RTASTGKRGD LLDVAGQPLR DSSDLAGNLV GRTAPLSGLQ RVYDDRLRAQ GGAVVVRDAK NATVQTLHTY PMTDGEAIRT TIDLRVQQAA EAALATAARP TGAMVAIDTR TGAILALANH PPSGSSRAVR GKYPPGSTFK IVTATAALMN GKAPDMPLDC TQTVSVGGRT FQNAESEQFG PIPLRTAFAR SCNTAFIRLE ESLPDGALEK AAQLYGFDGR PPLDIASVGG TFPTPRDAVE SASASIGQAR IEVSPLQMAS VAAAVASGTW HQPFVVGQSA RSNPIPPVVL PPLRDFMRAV VTEGTAAKVP MPGEVFGKTG TAEYKDGNPP PTHAWFVGYR GDVAFAVVVE DGGFGAETAA PVAARFLTAL DGGQIGAPGS GGQ
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