Gene Francci3_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3639 
SymbolilvH 
ID3905320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4346321 
End bp4346845 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content65% 
IMG OID637880962 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_482720 
Protein GI86742320 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC ATACCCTGTC CGTGCTGGTG GAGAACAAGC CCGGGGTGCT GGCCCGGGTC 
TCGGGCCTGT TCTCCCGGCG CGGGTTCAAC ATCGAGTCAC TCGCGGTCGG GCCGACCGAG
CAGCTTGACA TCTCCCGGAT GACGATCGTC GTCGTCGTGG AGGACCTGCC GCTGGAACAG
GTGACCAAGC AGCTCAACAA GCTGATCAAT GTTTTGAAGA TCGTCGAGAT GGACACCTCC
GCCTCGGTGC AACGTGAGCT GATGCTCGTG AAGGTGCGCG CCGACCTGTC GGTGCGATCC
CAGGTCCTCG AGACGGTCGC CCTGTTCCGT GCCAAGGTGG TCGACGTCGC CCAGGACGCC
GTCACCATCG AGGCGACGGG AACCCGCGAC AAGCTGGACG CCCTCATCCG CATGCTGGAG
CCGTTCGGAA TCCGGGAACT GGTCCAGTCC GGCCTGGTGG CACTCGGCCG CGGATCGCGT
TCGATCACCG ATCGCAGCCT GCGAGCAGTC GACCGTCCGG CCTGA
 
Protein sequence
MTRHTLSVLV ENKPGVLARV SGLFSRRGFN IESLAVGPTE QLDISRMTIV VVVEDLPLEQ 
VTKQLNKLIN VLKIVEMDTS ASVQRELMLV KVRADLSVRS QVLETVALFR AKVVDVAQDA
VTIEATGTRD KLDALIRMLE PFGIRELVQS GLVALGRGSR SITDRSLRAV DRPA