| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3635 |
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| Symbol | |
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| ID | 3905316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4340270 |
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| End bp | 4342003 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637880958 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_482716 |
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| Protein GI | 86742316 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC AGCAGCCGTC CGGCATGCCG GTCGAGAAGT ACCGTCCGTT CGTCCCCGTC
TCACTTCCCG ACCGGGCCTG GCCCGAGCGG ACGATCACTC GCGCCCCGCA ATGGTGCAGT
GTCGATCTGC GCGACGGTAA CCAGGCACTG ATCGACCCGA TGACCCCCGC CCGCAAGATG
CAGATGTTCG AGCTGCTGGT GGCGATGGGG TACAAGGAGA TCGAGGTCGG GTTCCCGGCG
GCCAGCCAGA CCGACTTCGA CTTCATCCGG CAGCTGATCG AATCAGATCG CATCCCGGAC
GACGTCGTCA TCCAGGTCCT GACGCAGGCG CGGGAGGACC TGATCGAGCG CACGGCCGCG
TCGCTGGTCG GCGCGGACCG GGCGCTGATC CACCTGTACA ACTCGACATC CACGTTGCAG
CGGCGGGTGG TGTTCGGTCT TGATCGGGCG GGGGTGACCG AGATCGCGGT GCAGGGCGCT
CGGTGGTGTG CCCAGTACGC CGAGAAACTA CTGGACGGCA CCGATGTGCG CTGGCAGTAC
AGCCCGGAGT CGTTCACCGG CACCGAACTC GACTACGCGG TGGAGGTGTG CGAGGCAGTC
ATGGACGTGT GGGCGCCGAC CCCGCAGCGT CCGGTCGTGC TGAACCTGCC GGCGACGGTC
GAGATGTCGA CCCCGAACGT CTACGCCGAC CAGATCGAAT GGGTCGGGCG GAACCTGACC
CGCCGGGATG CCGTCGTGCT GTCCCTGCAC CCGCACAACG ACCGGGGCTG CGCGGTCGCC
GCGGCGGAAC TGGGTGTGCT GGCCGGCGCC GACCGGGTCG AGGGCTGCCT GTTCGGCAAT
GGGGAACGGA CCGGAAACGT CTGCCTGGTC ACGCTGGGGA TGAACCTGTT CTCGCAGGGG
ATCGACCCGA TGATCGATTT CTCGGACATC GACGGGATCC GACGCGCGGT GGAGTACTGC
AACCAACTGC CCGTCCATCC CCGTCATCCC TACGGCGGCG ACCTCGTCTA CACCGCCTTC
TCCGGCTCCC ATCAGGACGC CATCAAGAAG GGTTTCGAGG CCATGGAGCG CACCGGCCAG
ACCCGCTGGG AGGTGCCCTA CCTGCCGATC GACCCGAAGG ACGTCGGCCG CTCCTACGAG
GCGGTGATCC GGGTGAACAG TCAGTCCGGC AAGGGAGGGG TGGCATACCT GCTGAAGTCC
GAGCACTCCC TGGACCTGCC GCGCCGGCTG CAGATCGAGT TCTCCGGTGT CGTACAGCGC
CACACCGACT CCGCGGGCGG CGAGGTGACG GCCGAGGAAC TCTGGACGAT TTTCCGCAGC
GAGTACTTCC TGGACGGCGC GGAGGGGTCC GGCCCGCTCG AACTGCTGGG CTCCCGGACG
ACGGCGGCGT CGGGCGATCG GGACGAGGTC TCCGTCTCGG TCCGTTTCCA GGGGGCCGAC
ACGGTGATCA CGGGAACCGG CAACGGCCCC ATTGACGCAT TCGTCACGGC GCTCGCCAGC
CGCGATCTGA CCGTGCGGAT TCTGGACTAC AACGAGCACG CCCTGGGCTC GGGAGCGGAT
GCGCGAGCGG CCGCGTACCT CGAGGTGGCC GTCGACGACC GGATCTTCTG GGGAGTCGGG
ATCGACGCCA ACATCGTGAC GGCGTCCCTG CGGGCCGTGG TGAGTGCCGT GAACCGGGCT
GCCCGGGACC GTTCGGTGCC CGCGCGGGCT GGTCGTGGTG GTGGCGCTGG TTAG
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| Protein sequence | MTTQQPSGMP VEKYRPFVPV SLPDRAWPER TITRAPQWCS VDLRDGNQAL IDPMTPARKM
QMFELLVAMG YKEIEVGFPA ASQTDFDFIR QLIESDRIPD DVVIQVLTQA REDLIERTAA
SLVGADRALI HLYNSTSTLQ RRVVFGLDRA GVTEIAVQGA RWCAQYAEKL LDGTDVRWQY
SPESFTGTEL DYAVEVCEAV MDVWAPTPQR PVVLNLPATV EMSTPNVYAD QIEWVGRNLT
RRDAVVLSLH PHNDRGCAVA AAELGVLAGA DRVEGCLFGN GERTGNVCLV TLGMNLFSQG
IDPMIDFSDI DGIRRAVEYC NQLPVHPRHP YGGDLVYTAF SGSHQDAIKK GFEAMERTGQ
TRWEVPYLPI DPKDVGRSYE AVIRVNSQSG KGGVAYLLKS EHSLDLPRRL QIEFSGVVQR
HTDSAGGEVT AEELWTIFRS EYFLDGAEGS GPLELLGSRT TAASGDRDEV SVSVRFQGAD
TVITGTGNGP IDAFVTALAS RDLTVRILDY NEHALGSGAD ARAAAYLEVA VDDRIFWGVG
IDANIVTASL RAVVSAVNRA ARDRSVPARA GRGGGAG
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