| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3626 |
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| Symbol | |
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| ID | 3904182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4331109 |
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| End bp | 4331951 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637880949 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_482707 |
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| Protein GI | 86742307 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.286809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGGGC CGCCCACCGG CCGGTCGTGT CAGCGCCTTC CGCGGGCTCG GTACGGTTTG
GGGGTGCGTA TCGCGAGGTT TACCGATGGT TCGGAGCCTG GGTTCGGGGT CGTGGAGGGG
TCGATCGAGG CGGGTACGGC CGTGATCCGC GGCATCACCC CGCATCCGTT CGGTCCGTTC
TCCTTCACCG GCGTCCGCCG GGGGCTCGGC GACGTGCGGC TGCTCGCTCC CGTGCTGCCG
AGCAAGGTGC TCTGCGTGGG CAAGAACTAT GCCGACCATG TCCAGGAGAT GGGCGGTGAC
ACCCCGCCGC AGCGTCCGAT CCTCTTCCTC AAGCCCTCCA CCAGTGTCGC CGGCCCGGGC
GATCCGATCA TCCTTCCGTC GGACAGCGAG CGGGTCGACT TCGAGGGCGA GCTGGCGATC
GTCATCGGCC GGCTGTGCCG TGACGTCCCG GTGGAACGGG CCTTCGAGGT GGTGCTCGGC
TACACCTGCG CCAATGACGT GACCGCTCGC GATCAGCAGA AGGCGGACGG CCAGTGGACC
CGGGCCAAGG GCCATGACGC CTTCTGCCCC CTCGGTCCCT GGATCGAGAC GGATCTCGAC
CCGGCGGATC TGCCCATCCG CACCACCCTG GACGGCGAAC TGCGCCAGAG CTCCCGAACC
GGCCTGCTGC TGCGCGACGT CCCCTCGTTG ATCGCCTACC TGTCGTCGGC CATGACGCTG
CTACCCGGCG ACGTGCTGCT GACCGGAACG CCCGCGGGCG TGGGGCCGAT GTCACCGGGG
CAGACGGTGG CGGTGACAGT CGAGGGCATC GGGACGCTCA CTAACCCGGT GACGGCTCGC
TAG
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| Protein sequence | MAGPPTGRSC QRLPRARYGL GVRIARFTDG SEPGFGVVEG SIEAGTAVIR GITPHPFGPF
SFTGVRRGLG DVRLLAPVLP SKVLCVGKNY ADHVQEMGGD TPPQRPILFL KPSTSVAGPG
DPIILPSDSE RVDFEGELAI VIGRLCRDVP VERAFEVVLG YTCANDVTAR DQQKADGQWT
RAKGHDAFCP LGPWIETDLD PADLPIRTTL DGELRQSSRT GLLLRDVPSL IAYLSSAMTL
LPGDVLLTGT PAGVGPMSPG QTVAVTVEGI GTLTNPVTAR
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