Gene Francci3_3622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3622 
Symbol 
ID3904176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand+ 
Start bp4325064 
End bp4325771 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content74% 
IMG OID637880943 
ProductIclR family transcriptional regulator 
Protein accessionYP_482703 
Protein GI86742303 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.464151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACAGC TTAGCGGAGT CGGAGTCCTG GACAAAGCAG CCCTCGTGCT GACCGCCGTC 
GAGGCGGGAC CGGCGTCACT GGCTGATCTG GTGGCCCGAA CCGGGCTCAC CCGCGCGACG 
GCGCATCGGC TGGCACAGGC TCTCGAGGTC CACCGCCTGC TCGGCCGGAC CGCCGACGGC 
CGCTTCGTCT CCGGGCCGCG GCTCGCCGCG GGGACCCCGA CCCCCTTGCC GTGGGACCTG 
CTGGATCGGG CCGGCCGGGT TCTCGCCGAG CTTCGTGAGG TGACCGGAGA AAGTGCCCAG 
CTCTATGTGC GGCGCGGGGC CCTGCGCCAC TGCGTCGCCG CCTCCGAACG CGCCAGCGGC 
CTGCGCGACA CCGTGCCCGT CGGCGCCGCA CTCCCGATGA CCGCGGGGTC CGGTGCTCAG 
GTCCTCCTCG CCTTCGCGGC GCATCCCGAG CCGGAACTGC TCGCCGGAGC CCTGTTCGAC 
GAAGCTGTCC TCCGCCGGGT GCGCGATCGT GGCTGGGCGG AGAGCATCGG GGAACGCGAG 
AGGGGGTTGG CGTCCGTGTC CGCCCCGGTG CACGATGGCA CGGGAACGGT GATCGCGGCA 
GTGTCCCTGT CGGGACCGGT GGAGCGGCTC ACCCGGTCGC CGGGGCGCCG GCACCGCGCG 
GCGGTCCTCG CCGCGGCGGC CCGGCTCTCG ACACCGGCCG TCGGCTGA
 
Protein sequence
MKQLSGVGVL DKAALVLTAV EAGPASLADL VARTGLTRAT AHRLAQALEV HRLLGRTADG 
RFVSGPRLAA GTPTPLPWDL LDRAGRVLAE LREVTGESAQ LYVRRGALRH CVAASERASG 
LRDTVPVGAA LPMTAGSGAQ VLLAFAAHPE PELLAGALFD EAVLRRVRDR GWAESIGERE 
RGLASVSAPV HDGTGTVIAA VSLSGPVERL TRSPGRRHRA AVLAAAARLS TPAVG