| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3616 |
|---|
| Symbol | |
|---|
| ID | 3904170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4316386 |
|---|
| End bp | 4317264 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637880937 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482697 |
|---|
| Protein GI | 86742297 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1920] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.396578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCT TCGTGTGGCT CCCACGAAAC GGAGTGTCCT GGACGGTCGT GCTGCCGCTG
AAGAACCTCA CCCGGGCGAA GACCCGGCTG GACCGCCCCG ACCGGAGCCG GCTGGCCCTT
GCGATGGCCT TGGACACGGT GATGGCGGTA CTTGAGTCCG AGACCGATCT GGTCGGCGCC
GTGATGATCG TAACGAACGA TCGGACGGCC GACCACGCCC TGTCGACTCT CCTCAATTCC
CACTATATTG GCGCAGATCA ACCGAATCTT TCCCCGGCTG CGAGGAGTGC TCGGCTCGTC
GTGATTCCGG ACGAACCCGA CCGAGGTCTC AATCCCGCTC TGGTGCACGG CGCCGCGCTG
GCCTCGGCCC GCTGGCCCAC CCGTGCGGTG GCTGCCCTCT CCGCCGACCT TCCCGCGCTG
CGCCCCCCCG AGCTGCATCA GGCGCTGTCC GAGGCGAGCC AGCACCGTCG AGCGGTTCTC
GCCGACGCGA CCGGAACGGG AACCGTTCTG CTGACCGCGT CGGCCGGCGC CACCCTGCAG
CCCGCATTCG GACCACACAG TCACGCCACG CACCGTCGCT CCGGAGCGGT GGATCTGACG
GGAACCCTCG GTGGCTCGGT ACCGGGACTG CGACGTGACG TCGACACGCT GGCGGATCTG
GCGCAGGCCC GGGACCTGGG GGTAGGCCGG GCCACCAGGG CGGCGCTGAC CGCCGGGTAT
CACTCCCCGC TCGTGGCGGA GGACTCCGGC GGATCCGGCG GCGAATCGGG CACCTCGGCG
GAGTCAGGGC TGTCCGTACC ACCGGGGATC GTAGGCGGAA CCCAGCGCCG GATCGTGAGC
GACGCGAGCG GACCAGGTCG GGCGAAGAAG TATCCCTGA
|
|---|
| Protein sequence | MVAFVWLPRN GVSWTVVLPL KNLTRAKTRL DRPDRSRLAL AMALDTVMAV LESETDLVGA
VMIVTNDRTA DHALSTLLNS HYIGADQPNL SPAARSARLV VIPDEPDRGL NPALVHGAAL
ASARWPTRAV AALSADLPAL RPPELHQALS EASQHRRAVL ADATGTGTVL LTASAGATLQ
PAFGPHSHAT HRRSGAVDLT GTLGGSVPGL RRDVDTLADL AQARDLGVGR ATRAALTAGY
HSPLVAEDSG GSGGESGTSA ESGLSVPPGI VGGTQRRIVS DASGPGRAKK YP
|
|---|
| |