| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3612 |
|---|
| Symbol | |
|---|
| ID | 3904166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4312639 |
|---|
| End bp | 4313472 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637880933 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_482693 |
|---|
| Protein GI | 86742293 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCTC GGAGCATCCG GAGCGAGCCG CCGCCGGAAC CGAGCTCCGC CCCGCCCCGC
GTACTGACGA TCGCCGGATC GGATTCTGGC GGCGGCGCGG GCATTCAGGC AGATCTCAAG
ACGATGCTCG CCCTCGGCGT CCACGGCATG AGTGCGATCG TCGCGGTGAC GGCACAGAAT
TCCCTGGGCG TCCATGGTGT GTGGGATCTC CCTCCGGAAG CGGTCCGAGC CCAGATCAGA
GCGGTCGTGG CGGACATCGG GGTCGACGCG GTGAAGACGG GGATGCTCTC CTCCGCGGCT
CTGGTCTCGC TGGTCGCCGC CGAACTCTCG CGGCTCGACG TACCCGTCGT GGTCGATCCG
GTCAGCGTCT CCAAGCACGG CGACCCCCTG CTGTCCCCGG AGGCGGTCGA GGTGGTCCGT
ACGGAGCTCA TGCCCCGCGC CACCATCGCC ACACCGAACC TCGACGAGGT ACGTCTGCTG
ACCGGGGTGG AGGTGCTGGA CGTCGCCGAC CTGCCCAGAG CCGCCGAGGC GATGCTCGCC
CTGGGCCCGC GCTGGGTGCT GGTGAAGGGC GGGCATCTTC CCGGCGACGC GGTCGACCTG
CTCACCGACG GGACCACCGA GGTCGTCCTC CGAAGCCCCC GCCTGGACCG GCGGCACACC
CATGGCACCG GATGCACGCT GGCCTCCGCG ATCGCCGCGC ACCTGGCGCA GGGGCGTGGT
CACGTCGAGG CCGCACAGGC CGCCAAGGCC TACGTCAGTG GCGCCCTGGC CAGCGGCTTT
CCGCTCGGCG CGGGGATCGG CCCGGTAGAC CACGGCTATC GTCACCGTAG GTAG
|
|---|
| Protein sequence | MNARSIRSEP PPEPSSAPPR VLTIAGSDSG GGAGIQADLK TMLALGVHGM SAIVAVTAQN
SLGVHGVWDL PPEAVRAQIR AVVADIGVDA VKTGMLSSAA LVSLVAAELS RLDVPVVVDP
VSVSKHGDPL LSPEAVEVVR TELMPRATIA TPNLDEVRLL TGVEVLDVAD LPRAAEAMLA
LGPRWVLVKG GHLPGDAVDL LTDGTTEVVL RSPRLDRRHT HGTGCTLASA IAAHLAQGRG
HVEAAQAAKA YVSGALASGF PLGAGIGPVD HGYRHRR
|
|---|
| |