Gene Francci3_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3604 
Symbol 
ID3904158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4305356 
End bp4305967 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content66% 
IMG OID637880925 
Producthypothetical protein 
Protein accessionYP_482685 
Protein GI86742285 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGAT CCCACTTTCG CCGTCGGACC CCGAGGGGTC CCCTTGTACT GGACACCCGT 
GAGCTCGGTC GTCGGCCCGG GTCGATGCGG CTTGTCCGGG CGCAGGCGGA ACTTCCCGCC
GATCTCGGAA CCGAGATGAT GTGGGTGCCG GCCGGCGCAA GCGTCACCCT GGACCTGCGT
CTCGAATCGG TGATCGAGGG TGTCCTGGTC AGCGGGAGCG TCGTGGCGCC GCTTCGGGGT
GAATGTGCGC GCTGCCTGGA CGACGTGTCC GAGGTCAGCA TGGTCGAGTT TCGCGAGCTG
TTCTACTACC CTGACCGAGC CGTGGACCTG GGTGACGACG AAGATGCTCG GGTACTGATC
GATGATCATG CGGACATCGA GCCCGTGGTG CGGGATGCCC TGGTACTCAA CCTTCCGCTG
TCACCCATCT GCCGTCCGGA CTGTGCGGGA CTCTGCGTGG ACTGCGGGGT GCGTCTCGAC
GATGTCGAGC CTGGACATTC CCATGCGCGA TCCGACCCGA GATGGGCGGC GCTGTCCGCG
CTGGCCGGCA GCGGAGCGAC GGGAACCGAG AAGGGTCGCA CCGACCCTCA TGAGAGCAAG
GAGAAGGAAT AG
 
Protein sequence
MTGSHFRRRT PRGPLVLDTR ELGRRPGSMR LVRAQAELPA DLGTEMMWVP AGASVTLDLR 
LESVIEGVLV SGSVVAPLRG ECARCLDDVS EVSMVEFREL FYYPDRAVDL GDDEDARVLI
DDHADIEPVV RDALVLNLPL SPICRPDCAG LCVDCGVRLD DVEPGHSHAR SDPRWAALSA
LAGSGATGTE KGRTDPHESK EKE