| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3595 |
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| Symbol | |
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| ID | 3904149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4292795 |
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| End bp | 4294348 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637880916 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_482676 |
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| Protein GI | 86742276 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGACA CCCTTTCCAG CCGCCTCGAC AAGGTCTTCG CGTCGCTGCG TGGCAGAGGG
CGCCTTACCG ATGCCGACAT CGACGCCACC GCGCGGGAGA TCCGGGTGGC TCTGCTCGAG
GCGGACGTCG CGCTCCCGGT CGTCCGTGGC TTCGTGGCCG CGGTGAAGGA GCGTGCCCGC
GGCGCCGAGG TCAGTGCGTC GTTGAACCCT GCCCAGCAGG TAATCAAGAT TGTCAATGAG
GAGCTCGTCG CGATCCTCGG CGGCGGCACG ACGACGCTGC GGTACGCCAA GACCCCGCCG
ACGGTGATCC TGCTCGCCGG CCTGCAGGGA ACGGGTAAGA CCACCCTGGC CGGCAAGCTC
GGGCGCTGGC TCAAGGCTCA GGGTCACACC CCGCTGCTGG TCGCGGCCGA CCTGCAGCGT
CCGAACGCGG TCAACCAACT GCAGGTGGTC GGGGCGCGGG CCGGGGTGGA GGTCTTCGCG
CCCGAGCCCG GCAACGGGGT CGGGGATCCG GTGCGCGTCG CGCGCGACGC GCTCGCGCAC
GCGCACCGGC AGGTCTTCGA TGTGGTCGTC GTCGACACGG CCGGGCGGCT CGGCGTCGAC
GAGGAGATGA TGCGGCAGGC GGCCGACATC CGCGACGCCG TCTCACCGGA TGAGATTCTC
TTCGTCCTGG ACGCGATGAT CGGTCAGGAC GCGGTCGCGA CCGCGAGCGC CTTCGCCGAT
GGCGTGGGAT TCAGCGGCGT GGTCCTGACC AAGCTCGATG GCGACGCGCG CGGTGGTGCG
GCCCTTTCGG TCGCCCAGGT GACCGGTCGG CCGATCATGT TCGCCTCCAC CGGTGAGGCC
CTGGACGACT TCGACGTCTT CCACCCGGAA CGCATGGCGT CGCGGATCCT CGGCATGGGT
GACGTCCTCA CCCTCATCGA GCAGGCCGAG AAGGCGTTCG AGGCCGAGCA GGCCGAGGCC
ATGGCGGCGA AGATGGTCGC CTCCGAGTTC ACTCTCGAGG ATTTCCTCGA GCAGATGCTC
GCGGTCCGCA AGATGGGCCC GATCGGCAAC CTGCTCGGCA TGCTGCCGGG GATGGGCCAG
ATGAAGGATC AACTGGCGCA GGTCGACGAT CGGGACGTCG ATCGGGTGGT TGCGATCATT
CGGTCCATGA CGCCGACGGA ACGGCGTGAT CCCAGGATCC TGCAGGCGTC CCGCAAGGCT
CGGGTCGCGC GTGGATCCGG GGTCACGGTC ACCGAGGTCA ACCAGTTGCT GGACCGGTTC
GCCGAGGCCC GCAAGATGAT GCGACAGATG GCTGGCGGCA TGGGGATGCC GGGGGGGATG
GGTCGAGCGA AGGCCGCCTC GGCTCGCAAG GCCGCGAAGA AGGGCAAGGG AGCCAGTCGC
AAGGGTAATC CGGCGGCACG GGCGGCCCAG GCCAAGGCGC AGAAGTCCAC TGCGCAGGAG
CGGGCGGCGA AGGGCCCCGC GCTTCCGGAC GGCATGCCGG ATCTCTCGGC GCTGATGCGG
CAGCAGGACG GCTTCGGTGG GATGCCGCCG CGCGGCCCCC GCGGGGGCCG TTGA
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| Protein sequence | MFDTLSSRLD KVFASLRGRG RLTDADIDAT AREIRVALLE ADVALPVVRG FVAAVKERAR
GAEVSASLNP AQQVIKIVNE ELVAILGGGT TTLRYAKTPP TVILLAGLQG TGKTTLAGKL
GRWLKAQGHT PLLVAADLQR PNAVNQLQVV GARAGVEVFA PEPGNGVGDP VRVARDALAH
AHRQVFDVVV VDTAGRLGVD EEMMRQAADI RDAVSPDEIL FVLDAMIGQD AVATASAFAD
GVGFSGVVLT KLDGDARGGA ALSVAQVTGR PIMFASTGEA LDDFDVFHPE RMASRILGMG
DVLTLIEQAE KAFEAEQAEA MAAKMVASEF TLEDFLEQML AVRKMGPIGN LLGMLPGMGQ
MKDQLAQVDD RDVDRVVAII RSMTPTERRD PRILQASRKA RVARGSGVTV TEVNQLLDRF
AEARKMMRQM AGGMGMPGGM GRAKAASARK AAKKGKGASR KGNPAARAAQ AKAQKSTAQE
RAAKGPALPD GMPDLSALMR QQDGFGGMPP RGPRGGR
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