Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3591 |
Symbol | trmD |
ID | 3904145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4290344 |
End bp | 4291156 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880912 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_482672 |
Protein GI | 86742272 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCCG ACATCGTCAC CATCTTCCCG GCCTATCTCG AGCCCCTGCG TCTGTCGCTC GTGGGCCGGG CTCAGGAGCA CGGAACCCTG CAGATCCATA CACATGATCT GCGGATGTGG ACCACGGATG TTCATCGCAC CGTGGATGAC GCCCCCTACG GGGGAGGCCC GGGGATGGTC ATGCGGCCCG AGCCCTGGGA CGCGGCGTTG TCGCAGATCA CCGCACGAGT GGCCGATAGC CGGCCCCGGG TCGTCGTGCC GACCCCGGCG GGGACTCCGT TCACTCAGCG CCACGCCGAA GAACTGGCGC GCGAGCCCTG GCTGGTGTTC TGCTGCGGGC GCTACGAGGG CATCGACGCC AGAGTGATCG AGACCTGGGC CGATGACGAG ATCTCCATTG GAGACTATGT GCTGGCCGGG GGCGAGGCCG CGACCCTGGT GATTCTCGAA GCGGTTACGC GGCTGCTGCC CGGAGTACTC GGTAACAGCG CCTCAGTCGC CGATGACTCT TTCTCCGACG GCTTGCTGGA GGGCCCGGTC TACACCCGTC CGCCGGTATG GCGGGGGACC GAGGTGCCGC CCGTTCTCCG CTCAGGCGAT CATGAGGCGA TCGCCCGCTG GCGTCGTTCC CAGGCGCTTC GTCGTACCCT GTTGCGGCGC CCGGACCTCC TGGAACACCG CGAGTTCGCC GAAGCGGACC GAGTCGTACT CGCTGCCGCC GCGGCCGAGG CGGCCGGGCG GATGCTGCCG GCCCCCACCG AGGGGACGGG CCTGATCCAT CATCGTGACG TCGAGGGGCC GGGCGAGGGG TAG
|
Protein sequence | MRADIVTIFP AYLEPLRLSL VGRAQEHGTL QIHTHDLRMW TTDVHRTVDD APYGGGPGMV MRPEPWDAAL SQITARVADS RPRVVVPTPA GTPFTQRHAE ELAREPWLVF CCGRYEGIDA RVIETWADDE ISIGDYVLAG GEAATLVILE AVTRLLPGVL GNSASVADDS FSDGLLEGPV YTRPPVWRGT EVPPVLRSGD HEAIARWRRS QALRRTLLRR PDLLEHREFA EADRVVLAAA AAEAAGRMLP APTEGTGLIH HRDVEGPGEG
|
| |