| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3591 |
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| Symbol | trmD |
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| ID | 3904145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4290344 |
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| End bp | 4291156 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880912 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_482672 |
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| Protein GI | 86742272 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCG ACATCGTCAC CATCTTCCCG GCCTATCTCG AGCCCCTGCG TCTGTCGCTC
GTGGGCCGGG CTCAGGAGCA CGGAACCCTG CAGATCCATA CACATGATCT GCGGATGTGG
ACCACGGATG TTCATCGCAC CGTGGATGAC GCCCCCTACG GGGGAGGCCC GGGGATGGTC
ATGCGGCCCG AGCCCTGGGA CGCGGCGTTG TCGCAGATCA CCGCACGAGT GGCCGATAGC
CGGCCCCGGG TCGTCGTGCC GACCCCGGCG GGGACTCCGT TCACTCAGCG CCACGCCGAA
GAACTGGCGC GCGAGCCCTG GCTGGTGTTC TGCTGCGGGC GCTACGAGGG CATCGACGCC
AGAGTGATCG AGACCTGGGC CGATGACGAG ATCTCCATTG GAGACTATGT GCTGGCCGGG
GGCGAGGCCG CGACCCTGGT GATTCTCGAA GCGGTTACGC GGCTGCTGCC CGGAGTACTC
GGTAACAGCG CCTCAGTCGC CGATGACTCT TTCTCCGACG GCTTGCTGGA GGGCCCGGTC
TACACCCGTC CGCCGGTATG GCGGGGGACC GAGGTGCCGC CCGTTCTCCG CTCAGGCGAT
CATGAGGCGA TCGCCCGCTG GCGTCGTTCC CAGGCGCTTC GTCGTACCCT GTTGCGGCGC
CCGGACCTCC TGGAACACCG CGAGTTCGCC GAAGCGGACC GAGTCGTACT CGCTGCCGCC
GCGGCCGAGG CGGCCGGGCG GATGCTGCCG GCCCCCACCG AGGGGACGGG CCTGATCCAT
CATCGTGACG TCGAGGGGCC GGGCGAGGGG TAG
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| Protein sequence | MRADIVTIFP AYLEPLRLSL VGRAQEHGTL QIHTHDLRMW TTDVHRTVDD APYGGGPGMV
MRPEPWDAAL SQITARVADS RPRVVVPTPA GTPFTQRHAE ELAREPWLVF CCGRYEGIDA
RVIETWADDE ISIGDYVLAG GEAATLVILE AVTRLLPGVL GNSASVADDS FSDGLLEGPV
YTRPPVWRGT EVPPVLRSGD HEAIARWRRS QALRRTLLRR PDLLEHREFA EADRVVLAAA
AAEAAGRMLP APTEGTGLIH HRDVEGPGEG
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