Gene Francci3_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3590 
SymbolrplS 
ID3904144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4289767 
End bp4290123 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content66% 
IMG OID637880911 
Product50S ribosomal protein L19 
Protein accessionYP_482671 
Protein GI86742271 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCC TGGACAGCCT CGACGCCGAG TCGCTGAGGA CCGACGTGCC CGAGTTCTGG 
CCGGGCGACA CCCTCAAGGT CCACGTGCGG GTCGTCGAAG GAAACCGTCA GCGCATCCAG
GTCTTCCAGG GTGCCGTCAT CCGCCGCCAG GGTGGCGGGG TGCGGGAGAC CTTCACCGTC
CGTAAGGTCA GCTTCGGCGT AGGCGTGGAG CGGACCTTTC CCCTCCACAG CCCGATCGTC
TCGAAGATCG AGATCGTGAG CCGTGGTGAC GTCCGACGGG CCAAGCTGTA CTACCTGCGT
CAGCTGCGCG GTAAGGCCGC CAAGATCAAG GAGAAGCGTG AGCCGGTCGC GCGCTGA
 
Protein sequence
MHTLDSLDAE SLRTDVPEFW PGDTLKVHVR VVEGNRQRIQ VFQGAVIRRQ GGGVRETFTV 
RKVSFGVGVE RTFPLHSPIV SKIEIVSRGD VRRAKLYYLR QLRGKAAKIK EKREPVAR