Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3577 |
Symbol | |
ID | 3904516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4276080 |
End bp | 4277345 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880898 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_482658 |
Protein GI | 86742258 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCA CGACCGCCGA ATCCGGACGT CCGGACCAGC CCCCGACCGC CGAGGCGGGC CGGCCCGTGC GGCTGACGCT CACCCGGCGA GCGGGCCGAG CGCCGCGTCA CCTCGCCGAC CTGACCCGGC AGGAACGGCG TGACGTCGCG GTGTCGCTGG GGCAGCCGGC CTTCCGCGCC GATCAGGTGG CCCGGCACTA CTATGCGCGG TTGATCGCCG CCGATGAGCC CGAGGCGATG ACCGACCTGC CGGAGCGGGA CCGCCAGCCG CTCCTCGACG CCCTGCTGCC GAGGCTGCTC GTCCCGGTGC GGACGCTGAG CTGCGACGAC GGTCTGACCC GCAAGACGGC ATGGCGGACC GTGGACGGCG CTTCTCTCGA GTCTGTGATC ATGAGATATC CGGATCGCGC GACGGTCTGT GTGTCGAGCC AGGCGGGCTG CGGCATGGGC TGCCCGTTCT GTGCCACCGG TCAGGGGGGG CTGACCCGAA ACCTGTCGAC CGCGGAGATC GTCGAACAGG TCGTGCACGC CGCCCGGGTT CTCCGGCGCC GTGAGCTCGC GGGCGGCGAG ACCAGGTTGT CGAACGTGGT CTTCATGGGG ATGGGCGAGC CGCTGGCGAA CTATGCCGCG GTGATCGCCG CGCTACGCCG CCTCACCGCT CACCCCCCCG AGGGCCTGGG CCTGTCGGCT CGCGGCCTGA CGGTCAGCAC CGTCGGCCTT GTTCCGGCGA TTCGTCGTCT CGCCGGAGAG GGCCTGCCGG TGACTCTGGC GGTGTCCCTG CACGCCCCGG ACGACGTTCT GCGGAACGAA CTCGTCCCCA TCAACACCCG TTGGCCGGTG GTCGAGGTGC TCGCGGCCGC CTGGGAGTAC GCCGAGGTGA CCGGCAGACG GGTAAGCGTC GAGTACGCGC TGATCGACGG GGTCAACGAT GACGTGGGAC GCGCCGACGC CCTCGCGGAC CTGCTCGTCG GCCGGCTCGC GCATGTGAAC CTCATTCCGT TGAATCCGAC CGGTGGATCC TCGTGGCGCG CCAGCGCCCC GGCCGGCCAG CGCGCGTTCG TCCGCAGGCT CCGGGACCGC GGCATCGTGA CGACGGTGCG CGACACCCGG GGCCGGGAGA TCGCGGCAGC CTGCGGACAG CTCGCGGCCG AGCCGGCCGG GAAGCCGGAG CGGACGGACC GGCCGGAGCA GGTCGGATCC GACCGTCTCG TCGAGTTCGG TGCCGTGGGG AGCACGACGC CTGACGGTGA CCGTGTCCTT CGGTAG
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Protein sequence | MTATTAESGR PDQPPTAEAG RPVRLTLTRR AGRAPRHLAD LTRQERRDVA VSLGQPAFRA DQVARHYYAR LIAADEPEAM TDLPERDRQP LLDALLPRLL VPVRTLSCDD GLTRKTAWRT VDGASLESVI MRYPDRATVC VSSQAGCGMG CPFCATGQGG LTRNLSTAEI VEQVVHAARV LRRRELAGGE TRLSNVVFMG MGEPLANYAA VIAALRRLTA HPPEGLGLSA RGLTVSTVGL VPAIRRLAGE GLPVTLAVSL HAPDDVLRNE LVPINTRWPV VEVLAAAWEY AEVTGRRVSV EYALIDGVND DVGRADALAD LLVGRLAHVN LIPLNPTGGS SWRASAPAGQ RAFVRRLRDR GIVTTVRDTR GREIAAACGQ LAAEPAGKPE RTDRPEQVGS DRLVEFGAVG STTPDGDRVL R
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