Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3576 |
Symbol | |
ID | 3904515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4274771 |
End bp | 4276126 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880897 |
Product | Poly(3-hydroxybutyrate) depolymerase-like |
Protein accession | YP_482657 |
Protein GI | 86742257 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.875939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTGGG GAGCACGACG CCTGACGGTG ACCGTGTCCT TCGGTAGTCC GACGAGTCGA CGCCGGGGGG CCTCCCGGCC GGGTATCCGG GCGACGAACA CCGTATGGCT GCCGATCACG GCCGCCGCCG GAGTGTTGCT GCTGCTCCTG TGGTACGCGA TGTCCCAGGA GCCGGGGCCG GCGAAGACCT CGGCGACCCA GGCCGCTCTC GGAGCATCCG GCGGTCGTGC CGCCGGTGCC GCCGTGGCGT CGGCCATACC GTTGCCCACG GTCCCACCGC CCCCCGAGAG CGGCTGCGTC ACCGGGAAGA CCCTGCCGTC CGGGATCGGT ACCCGCGCGC TGCGGGTGGG AGGAACCGAG CGCGGCTACG TCCTCGCCGT ACCGACCGCG GGTCCACGGG CCAGGCCACT ACCACTGATC TTCAATTTCC ATGATCTGAA TCAGACGCCG GAAGATCTGG AAGCGTACAC GCGGCTCGCC GATCAGGGGA CGAAGGCGGG CTTCGTGGTC GCCGCCCCGA TCGGGACGCA GATGCGGTGG AACTTCACCA GATCGAAGGC GGTGGGACCC GACGACGTAC TCTTCGTCGG CGCGCTGCTC AACGACCTCG TTGGTCAGAT GTGCCTGGAC GCGGGACGCG TCTTCGCCGT GGGCTACGGG GACGGCGCGA ACATGGTGCT CACGCTGGCC TGCGCGCTGC CGGGCCGTCT TGCGGCGGCG GTGACCGTCG GGTCGAGCGT GCTGCCCGGC TCCTGCGCCA AGCCCGCCAC CAACGTCCTG GAGATCCATG GGACCTCGGA CCAGATCGCA CCGTATGCCG GCGGAGGTGC TCCGCGACCG GTCCCCTTCA CCGGGGTCGT CGCGCAGCCC GTGGAAGACC GGCTCGCCCG GTACGCCTCC GCTCTGGGCT GCGGCGGAGC CCGCCAGACC TCCCGGGACA CGGCCGCCTG GCAGCGCACC GTGTGGAGCG GCTGCCCAGC CGGCCACGAT GTCGGACTGT TAGCCATGCA GGGCGCGGGG CACACCTGGC CGGGGGCGCA GGCACGCCCG GCGCTGGGTC CGACCTCCGT CAGCCTGAGT GCCACCATTG TGGCGTTGAC CTATTTCGGT TACACGCCTA CGCCCGCGAC AAGTGGCCTG CCCGCTCCCG CCGTCTCCGC CGGTCCCGCC GGCCCGGGCG TCGCCACCAG TCCGACTCCC GCGGCACCGT CGGCTGAATC CTCCGGACCC GCCGCATCCT CCGGACCTGC CACCACGCCC GCGTCGCCCG CCGCCCCGGA TGCCGCCCCC CGTGCCGAAC CGTCCGGGCA GCCGGCAGCC GGCGCCACAC CTTCTTCCTC ACCCGGCCGG GGATGA
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Protein sequence | MPWGARRLTV TVSFGSPTSR RRGASRPGIR ATNTVWLPIT AAAGVLLLLL WYAMSQEPGP AKTSATQAAL GASGGRAAGA AVASAIPLPT VPPPPESGCV TGKTLPSGIG TRALRVGGTE RGYVLAVPTA GPRARPLPLI FNFHDLNQTP EDLEAYTRLA DQGTKAGFVV AAPIGTQMRW NFTRSKAVGP DDVLFVGALL NDLVGQMCLD AGRVFAVGYG DGANMVLTLA CALPGRLAAA VTVGSSVLPG SCAKPATNVL EIHGTSDQIA PYAGGGAPRP VPFTGVVAQP VEDRLARYAS ALGCGGARQT SRDTAAWQRT VWSGCPAGHD VGLLAMQGAG HTWPGAQARP ALGPTSVSLS ATIVALTYFG YTPTPATSGL PAPAVSAGPA GPGVATSPTP AAPSAESSGP AASSGPATTP ASPAAPDAAP RAEPSGQPAA GATPSSSPGR G
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