Gene Francci3_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3561 
Symbol 
ID3904500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4258363 
End bp4258761 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content69% 
IMG OID637880882 
Producthypothetical protein 
Protein accessionYP_482642 
Protein GI86742242 
COG category[S] Function unknown 
COG ID[COG1550] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0386445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.80653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATCG GAACCCTCAG CCTTGATCTG CTGCTCGGTG ACGTGCACTC GTTGAAGGAG 
AAACGGTCGG TGGTGCGGCC GATCGTGGCG GAGCTGCGTC GCCGTTTCGC CCTCAGCGTG
GCCGAGACCG GCCATCATGA TCTGCACCGG CGAGCCGAGA TCGGGATGGC GGTCGTCGCC
GCGGACCGGG CGCACTGCGT CGAGGTCCTC TGTTCCTGCG AGCATCTGGT GGCCCAGCGA
CCGGACGTCG AGGTCCTCGC CGCGCGGGCG CGCTACTTTT CGGCGGACGA CGCGGACGAC
GAACCGCATG CACCCGGTGA ACCGCACGCA CCCGGTGCAT CTGCCGCGGT GAGCGTGCCG
CCGGCGGGAC CGGCGAACGA GGAGGTGGAC GGTGGCTGA
 
Protein sequence
MWIGTLSLDL LLGDVHSLKE KRSVVRPIVA ELRRRFALSV AETGHHDLHR RAEIGMAVVA 
ADRAHCVEVL CSCEHLVAQR PDVEVLAARA RYFSADDADD EPHAPGEPHA PGASAAVSVP
PAGPANEEVD GG