| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3549 |
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| Symbol | |
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| ID | 3904488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4243822 |
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| End bp | 4245465 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880870 |
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| Product | UDP-glucose 6-dehydrogenase |
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| Protein accession | YP_482630 |
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| Protein GI | 86742230 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.230497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGGA GCCTGATGAG CTCGTCGGAC AGCCTTGATG ATGCGGCGGC GCCCGGAACC
GGGCCTCGTC CACGCCTGAC CGTCATCGGC ACCGGGTACC TGGGGGCCAC CCACGCGGTG
TGCATGGCGG AGCTTGGCTT CGAGGTGCTC GCCGTGGACG TCGACCATTC GAAGATCGAG
CGGTTGTCCG CGGGGGAGAT CCCGTTCTTC GAGCCCGACC TCGCCGACCT CCTGCGCGCG
AACCTCCGGA CCGGACGGCT GCGTTTCACC ACCTCCTTCG AGGAGATTGC CGAGTTCGGC
GACGTGCACT TCGTCTGTGT GGGCACCCCC CAGCGTGCCG ACGGTTACGG GGCGGACCTG
AGCCACCTGC ACGCCGCCAT CGAGCGCCTC GCGCCGCTGC TGACCCGGCC GTGCCTCGTG
GTCGGCAAGT CGACGGTGCC GGCCGGCACG GCTGCGGGGC TCGCCCGGAC GATCGCGCAG
CTCGCCCCGG CGAACCGCCC GGTCGCGGGC GAGACGGCGC CCGGCGCGGC GGGGGCCGAC
GGGTTGGGCC GCGTCGAGGT GGGTCATGAC GGGTTGGGCC ATGACGAGGT GGACGAGCCC
GCCGCCGACA TCTCCAGCGA TCTCGCCGGC GTCCAGCTGG CCTGGAACCC GGAGTTCCTC
CGGGAGGGCT TCGCGGTGGC CGACACCCTG CGACCGGACC GGCTCGTCTT CGGTGTCGCC
TCCCCGGCTG CGGAGGGAGC GCTGCGGGCC GCTTTCGCGC CGGTGATCGC CCAGGGGGTG
CCGGTCATCG TGACCGACTA CGCGACGGCC GAGCTGGTGA AGACGGCGGC CAACTCCTTT
CTCGCGACGA AGATCTCCTT CATCAACGCG ATGGCGGAGG TGTGCGAGGC GGTCGATGCC
GATGTCCTGA CGCTGGCCGA GGCGCTGTCC CACGACGTGC GCATCGGCGG GAACTTCCTG
CGTCCGGGGG TGGGGTTCGG GGGCGGCTGC CTACCCAAGG ACATCCGGGC CTTCCAGGCC
CGCGCAGACG AGCTCGGGGT CGGTGCGGCG CTGCGTTTCC TGCGTGAGAT CGACGAGATC
AACAATCGTC GCCGGGACCG TGTGGTGGAC CTGGTCACCG CGGCCCTCGA CGGCACGCTG
GTCGGCCGGC GCCTCGTCGT GCTGGGCGCC GCGTTCAAGC CCAACTCCGA CGACGTGCGG
GACTCCCCGG CGCTCGCGGT CGCGGGGCTA CTGGCCGAGA CCGGCGCCGG GGTGACGGTC
GTGGATCCGG TCGCGACGCA CAACGCCCGG CAGGCCCTGC CCGGCCTCGC CTACAGCGAC
TCCGTCGAGG CCGTGGTCGA GGGGGCCGAC GCGCTGGTCC TGCTCACCGA GTGGCGCCAG
TTCGCCGACC TGGACCCGGC CCGGCTCGGG GCCGTGGTCC GGCGCAAGGT CGTGGTGGAC
GCCCGGCACG CGCTCGACGC CGACCAGTGG CGCCAGGCCG GATGGGTCTA CCTGGCCCCC
GGCCGGCCGA CCGGCGTCAT CCCGAGCTCG TTGCCGGAGC AGCGGCACCG GGGGGACGGA
GCGCCGCCGG CGCCGGTCGA GCAGTGCGGC GAGACGGGTG CGCGGCTCGC GGAGGTCGAG
GCGCGCGCGG GGCACCCGGT GTGA
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| Protein sequence | MRRSLMSSSD SLDDAAAPGT GPRPRLTVIG TGYLGATHAV CMAELGFEVL AVDVDHSKIE
RLSAGEIPFF EPDLADLLRA NLRTGRLRFT TSFEEIAEFG DVHFVCVGTP QRADGYGADL
SHLHAAIERL APLLTRPCLV VGKSTVPAGT AAGLARTIAQ LAPANRPVAG ETAPGAAGAD
GLGRVEVGHD GLGHDEVDEP AADISSDLAG VQLAWNPEFL REGFAVADTL RPDRLVFGVA
SPAAEGALRA AFAPVIAQGV PVIVTDYATA ELVKTAANSF LATKISFINA MAEVCEAVDA
DVLTLAEALS HDVRIGGNFL RPGVGFGGGC LPKDIRAFQA RADELGVGAA LRFLREIDEI
NNRRRDRVVD LVTAALDGTL VGRRLVVLGA AFKPNSDDVR DSPALAVAGL LAETGAGVTV
VDPVATHNAR QALPGLAYSD SVEAVVEGAD ALVLLTEWRQ FADLDPARLG AVVRRKVVVD
ARHALDADQW RQAGWVYLAP GRPTGVIPSS LPEQRHRGDG APPAPVEQCG ETGARLAEVE
ARAGHPV
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