| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3543 |
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| Symbol | |
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| ID | 3904482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4234026 |
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| End bp | 4235711 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880864 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_482624 |
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| Protein GI | 86742224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.132705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.131405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATC CGCATCCCGA CCTCGGCCCG CCGCCGCCGC TGCGCGCGGA CGGCCTTCGG
ATCATCCCGC TCGGTGGGGT TGGGGAGATC GGTCGCAACA TGACCGTCTT CGAACACGCC
GGCCGGCTGC TGATCGTGGA CTGCGGGGTG TTGTTCCCGG AGGACGTCCA GCCGGGGATC
GACCTGATCC TGCCCGACTT CACCGCCATC CGGGATCGCC TCGACGACAT CGAGGCGGTG
ATCCTCACCC ACGCACACGA GGATCACATC GGGGCGGTGC CCTACCTGCT GCGGGAACGG
CGTGACATCC CGCTGATCGG CACCCGGCTC ACCCTGGCGC TGATGAACGC GAAGCTCGCC
GAGCACCGCG TCAAGGCGGT CACTCAGGAG ATCCGGGAGG AGGAGCGGCA CGCCTTCGGG
CCGTTCGAGT GCGAGTTCTT CGCGGTCAAC CACTCCATCC CGGACGCCGT GGCCGTGGCC
ATCCGCACCG AGGCCGGGCT CGTCCTGCAC ACCGGCGACT TCAAGATGGA CCAGCTGCCG
CTCGACGGCC GGCTGACCGA CCTGGGGGGC TTCGCGCGGC TCGGCCGCGA GGGTGTGGAC
CTGCTGCTGT CCGACTCGAC CAACGCCGAG GTGCCCGGGT TCGTCACCTC CGAGCGGGAG
ATCGCCCCGG TGCTCGACGG AGTCTTCCGC GAGGCGACCC GCCGGATCAT CATCGCCTGC
TTCGCCAGCC ATGTGCACCG GGTGCAGCAG GTGCTCGACG CGGCCGAGGA GCACGGCCGG
TCGGTCTGCT TCGTGGGCAG GTCGATGGTC CGCAACATGG GAGTGGCCCG CGACCTCGGG
TTGCTGCGGG TGCCACCGGG TCTGATCGTC GACGCCCGGG ACGTGGACGC GCTGCCGGAC
CGCAACATCT GCCTGATCTC CACGGGCTCC CAGGGGGAGC CGCTCTCGGC CCTGTCCCGG
ATGGCCAACC GGGATCACCA GATCCGCATC CAGGCCGGCG ACACGGTCGT GCTCGCTTCC
AGCCTCATCC CCGGCAACGA GAACGCGGTG TTCCGGGTGA TCAACGGGCT GACCCGCTAC
GGCGCCAAGG TCGTTCACAA GGGCGTGGCG AAGGTGCACA CCTCGGGTCA CGCCCCGGCG
GGCGAGTTGC TCTACGTTCT GAACGCCACC AGGCCGTCCA ACGTCATGCC GGTCCACGGC
GAATGGCGGC ACCTGCGGGC CCATGCCAAG CTCGCCGAGG CGACCGGGGT GCCCCCGGAC
CACGTAGTGC TCGCCGAGGA CGGCATGGTC ATCGACCTGC TTGACGGCCG GGCGCGGATC
ACCGGCGTTG TTCCCTGCGG CTATGTCTAC GTTGACGGCG CCGCGGTCGG GGACGTCGGT
GAGCCGAGCC TGAAGGACCG CCGGATCCTC GGCGAGGAGG GTTTCATCAC GATCACCGTC
GTGGTGGACG CCGCGGCGGG CAAGGTCGTC GTCGGCCCGG ATCTCTCCGC CCGCGGCTTC
TCCGATGCGC CGGGCGCCTT CGACTCCGTC TCCAAACTGG TCAGCGACGG GCTGGTGGAC
GCGATGCGCA CCGGGATGAA CGATCTGACG GCCCTGCAGC AGCTCGTGCG GCGTACGGTC
GGTCGCTGGG TCAACGAGAA CTACCGGCGC CGTCCGATGA TCGTTCCGGT GGTTCTCGAG
GTCTGA
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| Protein sequence | MSHPHPDLGP PPPLRADGLR IIPLGGVGEI GRNMTVFEHA GRLLIVDCGV LFPEDVQPGI
DLILPDFTAI RDRLDDIEAV ILTHAHEDHI GAVPYLLRER RDIPLIGTRL TLALMNAKLA
EHRVKAVTQE IREEERHAFG PFECEFFAVN HSIPDAVAVA IRTEAGLVLH TGDFKMDQLP
LDGRLTDLGG FARLGREGVD LLLSDSTNAE VPGFVTSERE IAPVLDGVFR EATRRIIIAC
FASHVHRVQQ VLDAAEEHGR SVCFVGRSMV RNMGVARDLG LLRVPPGLIV DARDVDALPD
RNICLISTGS QGEPLSALSR MANRDHQIRI QAGDTVVLAS SLIPGNENAV FRVINGLTRY
GAKVVHKGVA KVHTSGHAPA GELLYVLNAT RPSNVMPVHG EWRHLRAHAK LAEATGVPPD
HVVLAEDGMV IDLLDGRARI TGVVPCGYVY VDGAAVGDVG EPSLKDRRIL GEEGFITITV
VVDAAAGKVV VGPDLSARGF SDAPGAFDSV SKLVSDGLVD AMRTGMNDLT ALQQLVRRTV
GRWVNENYRR RPMIVPVVLE V
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