| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3527 |
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| Symbol | |
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| ID | 3904466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4211793 |
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| End bp | 4216496 |
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| Gene Length | 4704 bp |
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| Protein Length | 1567 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637880849 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_482609 |
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| Protein GI | 86742209 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.917212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0702055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACA CCGGCGGAAG GTTGTCGGTC CCTCGACGCA GACTGGTCAA CGTGCCCAGC
TTCGCTTCCC CCGATCCGCC GGATCCGCTC ACGGCGTTCT CCGCCCCGAC CCGGAGCTGG
TTCGGCGCGG CCTTCACCGC CGCGACCCCC GCCCAGCGGG GCGCGTGGGA GGCGATTCGC
ACCGGCGGCA ACGCGCTGGT CGTCGCACCC ACGGGTTCGG GGAAGACACT GGCCGCCTTC
CTGTGGTCGC TGGACACCCT GGCCCGCTCG GCGCCGCCGG CCGAGCCCAC CCGGCGCTGC
CGGGTGCTGT ACGTCAGCCC ACTCAAGGCG CTGGCCGTCG ACGTCGAACG GAACCTGCGG
GCACCGCTCG CGGGGATACG CTCCGCCGCG CAACGGCTCG GTCTGCCCCA GCCGGACGTG
ACCGTGGGTC TGCGGTCGGG CGACACCCCC GCCGCCGAAC GACGCGGTTT CGGCACCCGG
CCCCCCGACG TCCTGATCAC CACCCCGGAG TCGCTCTTCC TCATCCTCAC CAGTGCCGCG
CGGGAGTCGC TGCGCGGCGT CCGGACAGTG ATCGTCGACG AGGTCCACGC GGTGGCGGGC
ACCAAGCGCG GCGCCCACCT CGCGCTGAGC CTGGAGCGTC TGGACGCCCT GCTGGACACC
CCGGCCCAGC GGATCGGCCT GTCCGCCACG GTGCGGCCGG TCGAGGAGGC CGCCCGATTC
CTGGGCGGAA CGGCCCCGGT GGCGGTAGTC CGCCCGCCCG CGGCCAAGAC CCTCCAGATC
GACGTCGTGG TGCCGGTCGA GGACATGACC CAGCTCGGCG GACAGCTCCT CGACGGGTCC
CCGGACGGCT CGGCGGCCTC CGCCCCGCAC CGAGCGTCGA TCTGGCCGGC GGTCGAGCAG
CGTGTCCTCG ACCTCGTGTT GGCTCATTCC GCCAGCATCG TCTTCGCCAA CTCGCGCCGG
CTCGCGGAGC GACTCTGCGC CCGGCTGAAC GAGCTGTACG CCGAGCGGCT CGCCGCGGCC
ACCGCCGCGG ACGAATCCGT GGCCGGGGAC GGGCCGGGGG AAGCCGGCCG GACGTCCCCC
GCGGCGCTGA TGGGCGCCTC GGGCCAAGGC GGCGGCACGG CGGGCTGGCC GGAGATCGCG
CGGGCCCACC ACGGCAGCGT GAGCCGCGAG CAACGGGCCG GAATCGAGGA GGATCTCAAG
GCTGGCCGGC TGCCCGCGGT CGTCGCGACC TCCAGCCTGG AACTCGGCAT CGACATGGGA
GCCGTCGACC TGGTCGTGCA GATCGGGTCC CCGCCGAGCG TCGCCGCCGG GATGCAGCGC
ACCGGCCGCG CGGGCCACCA GGTCGGCGCC GCCAGTCGCG GCGTCATCAT CCCGAAGCAT
CGCAGCGACC TGCTCGAATG TGCCGTGGTC GCCGAGCGGA TGCGCTCGGG GGCGATCGAG
CGGCTGCGGT ACCCGCGCAA CCCCCTCGAC GTGCTGGCGC AGCAGATCGT GGCAATGACG
GCGATGGAGG ACTGGCACGT TGACGAGCTC GGCGCGCTGG TCCGGCGCAC CGCGACGTTC
GCGACGCTGC CGACCTCCGC CTTCGAGGCG GTCCTGGACA TGCTCGCCGG CCGCTACCCC
TCCGACACGT TCGCCGAGCT GCGCCCCCGC ATCACCTGGG ACCGCGTCAC CGGGATCCTC
ACCGCCCGCC CGGGCGCCCA GCGGCTCGCC GTGACCAGCG GAGGCACCAT TCCCGACCGG
GGCATGTTCG GCGTCTTCCT CGTCGGGGAG CGCTCCAGCC GGGTCGGGGA ACTCGACGAG
GAGATGGTCT ACGAGTCGCG GGTCGGCGAC GTGGTGCTCC TCGGCTCATC CAGCTGGCGC
ATCGAGGAGA TCACCGCCGA CCGGGTCCTG GTGACGCCGG CTCCGGGACG GCCCGGCCGG
CTCCCCTTCT GGCATGGCGA CGCCCCAGGC CGACCCGCCG AACTCGGCCG CGCGCTCGGC
GCGTTCCTGC GCGAGATCAC CAGGTTGCCG GCGCAGGCGG CGGCCGACCG CGTCCGGGCC
GCCGGCCTCG ACGATCGGGC CACCGCCAAC CTGCTGCGCT ACCTCGACGA GCAGAAGGCT
GCCGTCGGCC GTCTCCACGA CGATCGGACG ATCGTCGTGG AGCGTTTCCG GGACGAGATC
GGCGACTGGC GCCTGGCGGT GCACTCCCCG TTCGGTGCTC CGGTGAACGC GCCCTGGGCG
CTCGCCCTGG GCGCCCGGCT GCGCGAGCGG TACGGGGTCG ACGTCCAGAT CATGCACACC
GACGACGGCA TCGTCGCCCG GATCCCGGAT GCCGCCGAGC CGCCCGGCGC CGATCTCGCG
CTGTTCGAGC CGGACGAGAT CGACGCGATC GTACGGGCGG AGATCGGGAG CAGCGCCCTG
TTCGCCAGCC GGTTCCGCGA GTGCGCCGGG CGGGCCCTGC TGCTGCCCCG CCGGACCCCG
GGGCGGCGGA CCCCGCTGTG GCAGCAGCGC CAGCGCAGCG CAGCGCTGCT GTCCGTCGCC
GCGACGTTCG CCAGCTTCCC CGTCGTGCTG GAGACCATGC GAGAGTGCCT GCAGGACGTG
TTCGACGTTC CGGCGCTCGC GGAGCTGATG CGCGAGGTGT CGGCCCGCAC GCTGCGGGTG
GTGGAGGTGG AGACGCCGTC CCCGTCTCCG TTCGCCTCCG CCCTGCTGTT CGGCTACGTC
GCCGCCTTCA TGTACGACGG GGACGTACCG TTGGCCGAAC GCCGGGCGCA GGTGCTGTCG
CTGGACAGCT CCCTGCTGGC CGAGCTCCTC GGCGAGGCGG ACCTGCGGGA GCTGATCGAT
CCAGCGGCGC TCGCGCAGGT CGCCGCCCAG CTCACGCGGC TCGCCCCGGA CCGCCACGCC
CGCGATGTCG AGGGAGTGGC CGACCTGCTG CGAATGCTCG GTGACCTCAC GACCGAGGAG
GCGGTCGCCC GGGGTGCCAC CCCGGGCTGG CTCGCCGAGC TCGAACAGAC CCGCCGGGCC
CTGCGGGTCC GTATCGCCGG CGAGGAGCGG TGGGTCGCGA TCGAGGACGC CGGCCGGCTG
CGCGACGCCC TGGGCGTACC GCTGCCGGTG GGAGTTCCCG ACGCCTTCAC CGAACCGGTG
CGTGACCCTC TCGGCGACCT GATCTCCCGC TATGCCCGTA CCCACGGACC GTTCGACACC
GAGGAACCGG CCGCCCGGCT GGGGCTGGGC ACGGCGGTGG TCGCCGGTGT CCTGGACGGG
CTGGTCCGCA GCGGCCGCCT CGTCCGCGGT GAGCTGCATC CCGACCGCGG CGGTGAGCAG
TGGTGCGACG CGGGCGTGCT GCGGGCGCTG CGACGACGCA GCCTTGCCGC CCTGCGCAAG
GAGGTCGAGG CGGTGCCGCC CCGGACCCTC GGTGCCTTCC TGCCGGCCTG GCAGTCGGTC
ACCAGCGGAC GTGGCCGGGG GGTGGACGGT GTGCTGCGCG CCGTCGAGCA GCTGCAGGGC
GCGCTGATCC CGGCGAGCGC ATGGGAACAG CTCGTCCTCC CGGCCCGCGT CGCCGACTAC
TCACCGACGA TGCTCGACGA GCTGTGCTCC GCCGGCGAGG TGCACTGGGC TGGCGCCGGC
GGGCTGCCCG GGGACGACGG CTGGTTGACC CTGGTCCTCG CCGACACCGC GCCCCTGCTG
CTGCCTCCGC CCGACCCGGA GATCGCCTCG GGTCCGCTGC ACACCGCGAT TCTCGACGCG
CTCACCGGCG GGGCGGCCCT GTTCTTCCGG GCGCTGTCCG ACCGGATGGG CTCGCTCGAC
GACACGGCGC TCGCTACCGC GCTCTGGGAT CTCGTCTGGG CGGGGCGGGT AACCAACGAC
ACCCTCGCCC CGCTGCGTGC CCTGCTGGGT TCCGCCGGCC GTCCGTACCG TGCCCCCCGT
CCCCGGGCGG CACGGTACGG ACGGCCGGCG ATGCCGCGGC GGGCCGGCCC CCCGACGGCC
GCCGGCCGCT GGTCGCTGCT GCCCGAGCGG GACACCGACC CGACCCGGCG CGCCCACGCG
CTGGCCGAGG CGCTGCTCGA GCGCCACGGC ATCGTCACCC GCGGCGCGGT GACCGGCGAG
CGGCACCCGG GCGGGTTCGC CGGGGTCTAC CGGGTCCTCA GCGCCTTCGA GGACGCCGGC
CGCGCCCGCC GGGGCTACTT CGTCGAGTCC CTGGGCGCGG CCCAGTTCGC CGTCCCGGGA
GCGGTCGATC GGCTGCGCTC CATCGCCGCG GCACAGCGGG ACGCCGAGGC GGCCCCGGCC
TGGGCGCAGC CGGCGGCCGG CCCACCGAGC TCATCGTCCG CGCAGGCCGT CGTCCTGGCC
GCGGCCGATC CGGCCAACCC GTTCGGTGCC GCGCTGCCCT GGCCGACCCG ACCGGGGGAT
GACGCGGACG GCGCCGCCGG CCACCGGCCG GGGCGCAAGG CGGGCGCGAT GGTCGTCATC
ATCGACGGGG AACTCATCCT CTACGTGGAA CGCGGGGGCC GTTCCCTGCT GTCATGGACC
GAGGACGACC ATCGGGTGGC CCCGGCGGTG GAGGCGTTGG CCCGCGCCGT GCGGGACGGC
CTGCTCGGCA GGCTCACGGT GGAGAAGGCG GACGGCCAGA CGATCGTCGG CAGCACCCTG
GGTGCCGCCC TGGAGCGCGC CGGTTTCCAC CCGACCCCGC GGGGCCTGCG GCTGCGGAGC
ATCAGTTCCG AGAGAAGGAA ATAA
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| Protein sequence | MNHTGGRLSV PRRRLVNVPS FASPDPPDPL TAFSAPTRSW FGAAFTAATP AQRGAWEAIR
TGGNALVVAP TGSGKTLAAF LWSLDTLARS APPAEPTRRC RVLYVSPLKA LAVDVERNLR
APLAGIRSAA QRLGLPQPDV TVGLRSGDTP AAERRGFGTR PPDVLITTPE SLFLILTSAA
RESLRGVRTV IVDEVHAVAG TKRGAHLALS LERLDALLDT PAQRIGLSAT VRPVEEAARF
LGGTAPVAVV RPPAAKTLQI DVVVPVEDMT QLGGQLLDGS PDGSAASAPH RASIWPAVEQ
RVLDLVLAHS ASIVFANSRR LAERLCARLN ELYAERLAAA TAADESVAGD GPGEAGRTSP
AALMGASGQG GGTAGWPEIA RAHHGSVSRE QRAGIEEDLK AGRLPAVVAT SSLELGIDMG
AVDLVVQIGS PPSVAAGMQR TGRAGHQVGA ASRGVIIPKH RSDLLECAVV AERMRSGAIE
RLRYPRNPLD VLAQQIVAMT AMEDWHVDEL GALVRRTATF ATLPTSAFEA VLDMLAGRYP
SDTFAELRPR ITWDRVTGIL TARPGAQRLA VTSGGTIPDR GMFGVFLVGE RSSRVGELDE
EMVYESRVGD VVLLGSSSWR IEEITADRVL VTPAPGRPGR LPFWHGDAPG RPAELGRALG
AFLREITRLP AQAAADRVRA AGLDDRATAN LLRYLDEQKA AVGRLHDDRT IVVERFRDEI
GDWRLAVHSP FGAPVNAPWA LALGARLRER YGVDVQIMHT DDGIVARIPD AAEPPGADLA
LFEPDEIDAI VRAEIGSSAL FASRFRECAG RALLLPRRTP GRRTPLWQQR QRSAALLSVA
ATFASFPVVL ETMRECLQDV FDVPALAELM REVSARTLRV VEVETPSPSP FASALLFGYV
AAFMYDGDVP LAERRAQVLS LDSSLLAELL GEADLRELID PAALAQVAAQ LTRLAPDRHA
RDVEGVADLL RMLGDLTTEE AVARGATPGW LAELEQTRRA LRVRIAGEER WVAIEDAGRL
RDALGVPLPV GVPDAFTEPV RDPLGDLISR YARTHGPFDT EEPAARLGLG TAVVAGVLDG
LVRSGRLVRG ELHPDRGGEQ WCDAGVLRAL RRRSLAALRK EVEAVPPRTL GAFLPAWQSV
TSGRGRGVDG VLRAVEQLQG ALIPASAWEQ LVLPARVADY SPTMLDELCS AGEVHWAGAG
GLPGDDGWLT LVLADTAPLL LPPPDPEIAS GPLHTAILDA LTGGAALFFR ALSDRMGSLD
DTALATALWD LVWAGRVTND TLAPLRALLG SAGRPYRAPR PRAARYGRPA MPRRAGPPTA
AGRWSLLPER DTDPTRRAHA LAEALLERHG IVTRGAVTGE RHPGGFAGVY RVLSAFEDAG
RARRGYFVES LGAAQFAVPG AVDRLRSIAA AQRDAEAAPA WAQPAAGPPS SSSAQAVVLA
AADPANPFGA ALPWPTRPGD DADGAAGHRP GRKAGAMVVI IDGELILYVE RGGRSLLSWT
EDDHRVAPAV EALARAVRDG LLGRLTVEKA DGQTIVGSTL GAALERAGFH PTPRGLRLRS
ISSERRK
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