Gene Francci3_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3525 
SymbolrecA 
ID3904464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4210237 
End bp4211274 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID637880847 
Productrecombinase A 
Protein accessionYP_482607 
Protein GI86742207 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.551254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0703421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAC TCGACCGTGA GAAGGCGTTG GATAACGCCT TGGCGCAGAT CGACAAGCAG 
TTCGGCAAGG GATCGGTCAT GCGGTTGGGG GACGACACCA GGCCGCCGGT CCAGGCCATC
CCCACCGGTT CGATTGCTCT GGATGTCGCG CTCGGCATCG GCGGGCTGCC GCGGGGGCGC
ATCATTGAGA TCTACGGCCC GGAGTCGTCC GGGAAGACGA CCGTCGCCCT GCACGCGGTG
GCGAACGCGC AGGCGGCTGG TGGTATCGCG GCGTTCATCG ACGCCGAGCA CGCGCTCGAC
CCCGAGTACG CGGGAAAGCT CGGCGTCGAC ACCGACGGTC TGCTGGTCTC CCAGCCTGAT
ACCGGCGAGC AGGCGTTGGA GATCGCGGAC ATGCTCGTCC GGTCTGGCGC GCTGGACATC
ATCGTCATCG ACTCGGTGGC CGCGCTGGTC CCGAGGGCCG AGATCGAGGG CGAGATGGGG
GACAGTCACG TCGGCCTCCA GGCCCGCCTG ATGTCCCAGG CCCTGCGCAA GATGACCGCG
GCGCTGGCGA ACTCCGGTAC GACCGCGATC TTCATCAACC AGTTGCGCGA GAAGATCGGG
GTGATGTTCG GCTCCCCGGA GACCACGACC GGTGGTAAGG CACTGAAGTT CTATGCGTCG
GTGCGCCTCG ATGTCCGTCG TATCGAAACT CTCAAGGACG GCACGGAGGC CGTGGGTAAC
CGGACCCGCG TCAAGGTGGT GAAGAACAAG GTGGCGCCGC CGTTTCGGAC CGCCGAATTC
GACATCGTCT ACGGAGGCGG TATCAGTCGG GAGGGTTCCC TGATCGACAT GGGTGTCGAG
CACGGCATTA TTCGTAAGTC CGGTGCCTGG TACACCTACG ACGGCGATCA GCTCGGCCAG
GGCAAGGAGA ACGCCCGGTC TTTTCTGCGG GACAACCCCG ATCTGGCCAA CGAGATCGAA
AAGAAGATCA AGGAGAAGCT CGGCATCCTG CCCAGTCTCG AATCCGATGC CGTGGCGCCC
GTTCCGGTCG ATCTGTAG
 
Protein sequence
MAGLDREKAL DNALAQIDKQ FGKGSVMRLG DDTRPPVQAI PTGSIALDVA LGIGGLPRGR 
IIEIYGPESS GKTTVALHAV ANAQAAGGIA AFIDAEHALD PEYAGKLGVD TDGLLVSQPD
TGEQALEIAD MLVRSGALDI IVIDSVAALV PRAEIEGEMG DSHVGLQARL MSQALRKMTA
ALANSGTTAI FINQLREKIG VMFGSPETTT GGKALKFYAS VRLDVRRIET LKDGTEAVGN
RTRVKVVKNK VAPPFRTAEF DIVYGGGISR EGSLIDMGVE HGIIRKSGAW YTYDGDQLGQ
GKENARSFLR DNPDLANEIE KKIKEKLGIL PSLESDAVAP VPVDL