| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3523 |
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| Symbol | |
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| ID | 3904462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4207341 |
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| End bp | 4209281 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880845 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_482605 |
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| Protein GI | 86742205 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.555023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.082287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGGCG TCCTCGTCGT CCTGTTGTCA CTCGTACTTG TTGTCCTGAG CGTTCTGATC
CTCGCCGTGG CGCGGTTGGT CCGGGCGACC CGGGTCGACA AGGTACCCGA CCCCGCTCCG
GTGGTGCCCC GAACCCCGGC CGCCCGGGGC GTCGGGGACG TGACGGGTCC GGCGGACTTT
GACGAGGAGC CGACGGTCCG GGTCCTGCCC GCCCCTTGGG AGGGTTCCGG TGCTCCGGCC
ACGACGGACG CCGACTCACC CGCCGATCGG GACGGCACCG CCGCGCGGAC CGGGGATTCG
GCGGTGACCG CCGGTCGCTC CGACGGCGGC CTCCGCGCGG CTCATGGTGG TAGCGCGGAG
GAGGCGGCGC AGATTGTGGC CCGAGCCGAA CGGGAGGCGG CGGAACGGTT GGCGCGGGCT
GAGCGGGATG CCGCCGAGAT CCGGCGGCGC GGCGAGGAGG ATGTCGCCCT ACTGCGCGAG
CGGATGCTCG CCGAGGCGGC GGTCGAAACC TCGCGAGTCC AGGCCGCGGC GAGAGAGTCC
GTCCGCGCCG AGCAGGAGGC CGCCCGGACC GAGATCGCCG CGACTCGGGC GGCGTTCGAC
GGTGAGCAGC AGGCCTGGCG GACGGAACTG CAGAGCCGGG AGGTTGCGAT AGCCGCCCGG
GAACAGCGCG TCGAGGACCG GATGGCCAGC CTCGACGATC ATGGTCGCCG GCTGGCGGAC
CGCGACCGCG ACCTGCTCGA CCGGGAGAAC GACCTGACCC GTCGGACGGC CGAGGTGGCC
GACCTCGAAC GTGCCCGTCA TGCCGCGCTG GAGCAGGTGG CCGGGCTCAC CGCCGGGCAG
GCCAGGGGAG AGCTGATCGC CGTCATCGAG CAGGAGGCCC GGCGGGAGGC GGCGCTGACG
GTCCGCGAGA TCGAGGCCCG GGCCGAGGAG GAGGGTGAGG AACGCGCCCG CAGGATCGTG
ACCACCGCCA TCCAACGGGT CGCGTCCGAC CAGACCACCG AGTCCGTCGT GACGGTCCTG
CATCTTCCCG GCGATGAGAT GAAGGGCAGG ATCATCGGGC GGGAGGGGCG CAACATTCGG
GCTTTCGAGT CCGTCACCGG GGTCAACGTG CTCATCGACG ACACGCCCGA GGCGGTGCTG
CTGAGCTGCT TCGATCCGGT GCGTCGCGAG GTCGGTCGCA TCACGCTGGC GGCTCTGGTG
TCCGACGGCC GGATCCATCC GCACCGCATC GAGGAGGAGT ACGCCCGCGC CCAGCTCGAG
GTGGCCGAGC GGTGCGTGCG GGCGGGCGAG GACGCCCTGC TTGAGACCGG CATCTCCGAG
ATGCACCCCG AGCTGGTTAA CCTGCTGGGC CAGTTGCGTT ACCGAACCAG CTACGGCCAG
AACGTGCTCG CGCACCTGAT CGAAAGCGCC CACCTCGCCG GAATCATGGC CGCCGAGCTG
CGCATGCCGC TTCCACTCGC GAAACGAGCG GCTCTGCTGC ACGACCTCGG CAAGGCGCTC
ACCCACGAGA TCGAGGGCTC TCACGCGTTG ATCGGGGCGG ATGTGGCCCG TCGCTACGGT
GAGGACGAGC AGGTCGTGCA CGCGATCGAG GCCCATCACA ACGAGGTCGC ACCCCGCTCG
ATCTGCGCGG TGCTGACCCA GGCCGCCGAC CAGATCTCCG GTGGCCGGCC TGGCGCCCGC
CGCGACAGCC TGGAGTCGTA TGTGAAACGG CTCGAGCGCA TCGAGCAGAT CGCCGGTGAC
CGTCCGGGTG TCGACAAGGT GTTCGCCATG CAGGCCGGCC GGGAGGTGCG TGTCATGGTC
GTGCCCGAGG AGATCGACGA TCTCGCCGCC CATCTGCTCG CCCGGGACGT CGCCAGGCAG
ATCGAGGAGG AGCTCACCTA TCCGGGTCAG ATCCGGGTGA CCGTCGTGCG CGAGACCCGT
GCGGTGGGCA CCGCCCGCTG A
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| Protein sequence | MEGVLVVLLS LVLVVLSVLI LAVARLVRAT RVDKVPDPAP VVPRTPAARG VGDVTGPADF
DEEPTVRVLP APWEGSGAPA TTDADSPADR DGTAARTGDS AVTAGRSDGG LRAAHGGSAE
EAAQIVARAE REAAERLARA ERDAAEIRRR GEEDVALLRE RMLAEAAVET SRVQAAARES
VRAEQEAART EIAATRAAFD GEQQAWRTEL QSREVAIAAR EQRVEDRMAS LDDHGRRLAD
RDRDLLDREN DLTRRTAEVA DLERARHAAL EQVAGLTAGQ ARGELIAVIE QEARREAALT
VREIEARAEE EGEERARRIV TTAIQRVASD QTTESVVTVL HLPGDEMKGR IIGREGRNIR
AFESVTGVNV LIDDTPEAVL LSCFDPVRRE VGRITLAALV SDGRIHPHRI EEEYARAQLE
VAERCVRAGE DALLETGISE MHPELVNLLG QLRYRTSYGQ NVLAHLIESA HLAGIMAAEL
RMPLPLAKRA ALLHDLGKAL THEIEGSHAL IGADVARRYG EDEQVVHAIE AHHNEVAPRS
ICAVLTQAAD QISGGRPGAR RDSLESYVKR LERIEQIAGD RPGVDKVFAM QAGREVRVMV
VPEEIDDLAA HLLARDVARQ IEEELTYPGQ IRVTVVRETR AVGTAR
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