| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3522 |
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| Symbol | |
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| ID | 3904461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4206514 |
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| End bp | 4207395 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880844 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_482604 |
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| Protein GI | 86742204 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0534138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.223285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG AGATCATCCT GGCCGATCCA CCGGGTCCGC GTGGTCGGCG TCGCATCCTG
ATCGCGAGCG TGGTGGCCGC CGCTGTCCTC GTCGGGCTGG TCACGCTGGC GGTGCTCCGC
CTCGCCGACT CTGGCCAGCT CGACGGCAAG CGCTGGAGTG TCTTCGTCGA TCAGCCGGCG
CTACGCACCC TGCTGTGGAA CGGGCTGCTC GACACGCTGC GCGCCGCGCT GACCGCGATG
CTGTTCGCCT CGGCGGTGGG GACCCTGCTT GCCCTGGCCC GGCTGTCCCG GCGCCGGGCG
GTACGCATCC CGGCCACGCT GCTGGTGGAG CTGTTCCGCA GCCTGCCCGT CCTGATGCTC
ATCCTGTTCG CCTACCTCGG TCTGCCGGCG CTCGGCTGGC GGCTCTCGGC GTTCTGGGCC
CTGGTCATCG GGCTGACCGC CTACAACGGG GCGGTGCTCA GCGAGATCTT CCGCGCCGGG
ATCCAGTCGG TCGACCGGGG GCAGACGGAG GCCGCGGCGG CGGTCGGGCT GCGGCCGGTC
CAGATCTTCC GCCTCATCCA GTTTCCCCAG GCGATCCGGC GGATGAGCCC GACGCTGGTG
AGCCAGCTGG TGACGTTGCT CAAGGACACC TCGCTGGGCT ACGTCATCGC CTACAGCGAG
CTGCTGCGGT CGGGGCGCGG GGCGGTCGAG TATCTGGGCA GCAGGTACGC CCTGCCCATT
TACACCGTCA TGGCGGTGAT GTACATCGTC ACCAACGGGT TGCTGTCGCT GCTGGCCCGA
TGGCTGGACC GCAGCCAGGA CCGCCGCCTC GGCGGCCGCG TTCCGGCTCA GCGGGCGGTG
CCCACCGCAC GGGTCTCGCG CACGACGGTC ACCCGGATCT GA
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| Protein sequence | MSTEIILADP PGPRGRRRIL IASVVAAAVL VGLVTLAVLR LADSGQLDGK RWSVFVDQPA
LRTLLWNGLL DTLRAALTAM LFASAVGTLL ALARLSRRRA VRIPATLLVE LFRSLPVLML
ILFAYLGLPA LGWRLSAFWA LVIGLTAYNG AVLSEIFRAG IQSVDRGQTE AAAAVGLRPV
QIFRLIQFPQ AIRRMSPTLV SQLVTLLKDT SLGYVIAYSE LLRSGRGAVE YLGSRYALPI
YTVMAVMYIV TNGLLSLLAR WLDRSQDRRL GGRVPAQRAV PTARVSRTTV TRI
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