| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3520 |
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| Symbol | |
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| ID | 3905254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4204803 |
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| End bp | 4205693 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637880842 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_482602 |
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| Protein GI | 86742202 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0548658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.231474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGCG AACGCCGCCG CAGGCGCGGC GGCGCGCTCC TCGCCGGCGC GACGCTGCTC
GCCGCCCTCG GACTGAGTGC CTGTGGGAGC AGCGGCGATG ACACCTCGAC ACCCACCCCC
TCGGTGACCT TCACCGCCGG CACCACCATG GCCCGGCTGC ACGACGCCGG AAAGATCATC
ATCGGGACGA AGTTCGACCA GAACCTGTTC GGGCTGAAGA ACCTCAGCGG CCAGCCCGAG
GGCTTCGACG TCGAGATCTC GAAGATCGTC ACGGATGCCC TGGGCATCCC GCGCGACAAG
GTCTCCTACG TGGAGACAGT GTCGGCCAAC CGTGAACCCT TCATCCAGCA GGGCCGGGTC
GACCTCGTGG TGGCCACCTA CACAATCAAC GACAAACGAA AGAAGGTCGT CGACTTCGCG
GGGCCGTACT ACGTCTCCGG CCAGTCCATC ATGGTCTCGA AGAACAACAC CGACATCACC
GGCAAGGACA CCCTTGCCGG CAAGAAGGTG TGCTCGGTCA GCGGATCCAC GCCGGCCGAG
AACATCCGCC GGGTGGCGCC CACCGCCCAG CTCGTGCTGT TCGATGTGTA CAGCAAGTGC
GCCGACGCGT TGAAGAACGG TCAGGTCGAC GCGGTCACCA CGGACAAGGG CATCCTGCTG
GGTCTCGTCG ACAAGGACCC TGACGCCTTC AAGGTGGTGG GTGGCACCTT CACGAAGGAG
CCCTACGGCA TCGGCCTCAA GAAGGGTGAC GACGCGTTCC GGAACTTCAT CAACGACACG
CTCGAGGCCG CTTACAAGGA CGGGCGCTGG GAGAAGGCGT ACACCTCGAC CCTCGGCAAG
GTGGAGCCGA CCGTGCCCAC TCCCCCGGCC GTCGACCGGT ACACGTCCTG A
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| Protein sequence | MSRERRRRRG GALLAGATLL AALGLSACGS SGDDTSTPTP SVTFTAGTTM ARLHDAGKII
IGTKFDQNLF GLKNLSGQPE GFDVEISKIV TDALGIPRDK VSYVETVSAN REPFIQQGRV
DLVVATYTIN DKRKKVVDFA GPYYVSGQSI MVSKNNTDIT GKDTLAGKKV CSVSGSTPAE
NIRRVAPTAQ LVLFDVYSKC ADALKNGQVD AVTTDKGILL GLVDKDPDAF KVVGGTFTKE
PYGIGLKKGD DAFRNFINDT LEAAYKDGRW EKAYTSTLGK VEPTVPTPPA VDRYTS
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