| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3516 |
|---|
| Symbol | miaA |
|---|
| ID | 3905250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4200022 |
|---|
| End bp | 4200897 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637880838 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_482598 |
|---|
| Protein GI | 86742198 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.194562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0755004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGTCG TGGGGCCGAC CGCCGGCGGC AAGAGTGACC TCGGCATCGA GATCGCGCTC
GCCCTCGGCG GCGAGGTGGT GAACGCGGAC TCGATGCAGC TCTACCGTGG GATGGACATC
GGTACCGCCA AGGTTCCCGA GGCGGAGCGT CGCGGGGTGC CCCACCATCT GCTCGACGTG
TGGGACGTGA CGCATCCCGC GGACGTCGCG AGCTTCCAGG CGGACGCCCG CCGGATAATC
GACGGCCTGC TCGCCGCCGG GCGCATTCCG GTGCTGGTCG GCGGTTCCGG GCTCTACGTC
CGCGCGGTTC TTGACAATCT TGCCTTCCCG GGGACCGATC CGGGCGTCCG GGCGCGGTGG
GAGGAGGAAC TGGCCCGCGT CGGCGCCCCG GCGCTGCACG ACCGGCTGGC CGCGCGGGCG
CCGCAGGCCG CCGCGGCGAT CCTGCCCAGC AACGGCCGGC GGATCGTGCG TGCCCTGGAG
GTCGTCGAGC TCACCGGAAC CTTCACGGCC ACCCTGCCGG AGCACCGCTC GGTCTATGAG
GTCGTGCAGA TCGGCGTGGA TCGCCCCGAT CTCGACCAAC GGATTGCGGA CCGGGTGGAG
AAAATGTGGG GTGCTGGTTT TCCTGACGAA GTGCGAAGGT TGGTGGAATG CGGCCTGCGG
GAAGGCCGAA CCGCGTCTCG CGCACTGGGA TATGCCCAGG TTCTGGCCTG GTTCGACGGC
GCAATGGACT CCGCCGAACA GGCCAAGCTC GCCACAATTA CGGCGACGCG GCGCTTTGCC
CGTCGACAAA GATCCTGGTT CCGGCGGGAT AACCGGATAG CCTGGTTGGA CCAACCAGAT
GTCACCCAGG TGCGACGGCT GGTGGGTTCG CTCTGA
|
|---|
| Protein sequence | MAVVGPTAGG KSDLGIEIAL ALGGEVVNAD SMQLYRGMDI GTAKVPEAER RGVPHHLLDV
WDVTHPADVA SFQADARRII DGLLAAGRIP VLVGGSGLYV RAVLDNLAFP GTDPGVRARW
EEELARVGAP ALHDRLAARA PQAAAAILPS NGRRIVRALE VVELTGTFTA TLPEHRSVYE
VVQIGVDRPD LDQRIADRVE KMWGAGFPDE VRRLVECGLR EGRTASRALG YAQVLAWFDG
AMDSAEQAKL ATITATRRFA RRQRSWFRRD NRIAWLDQPD VTQVRRLVGS L
|
|---|
| |