| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3507 |
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| Symbol | |
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| ID | 3905241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4188505 |
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| End bp | 4192350 |
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| Gene Length | 3846 bp |
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| Protein Length | 1281 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880829 |
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| Product | ribonucleoside diphosphate reductase, B12-dependent |
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| Protein accession | YP_482589 |
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| Protein GI | 86742189 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR01445] intein N-terminal splicing region
[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.127912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA GCCGCGGCAC GAAGCCGAGC AGGTCAGCGG CGAAAGCGAG TGGGTTGAAG
ATCCAGCGGT CACGTACCAC CGCCGGCGTC CACCCGTACG ACGAGGTCAC CTGGGAGTCC
CGGGACGTCG TCATGACCAA CTGGCGGGAC GGCTCGGTCA ACTTCGAGCA GCGGGGAGTG
GAATTCCCGC AGTTCTGGTC GGTGAACGCC TCCAACATCG TTACCAGCAA GTACTTCCGT
GGGGCGCCCG GCACGCCGGG GCGGGAGTGG TCGCTGCGGC AGTTGATCGA TCGGGTCGTG
CACGCCTACG GCGCGGCCGG CCGCGAGCAC GGCTACTTCG CCTCGGACAC CGACGCCGAG
ATCTTCGAGC ACGAACTGAC CTGGATGCTG CTCCACCAGG TCTTCAGCTT CAACTCGCCG
GTCTGGTTCA ACGTGGGAAC CCCCGCGCCG CAGCAGGTCT CGGCGTGCCA GCCCTATGAC
GCCCTCGTCA GCACGCCATC CGGTCTGGTT CCCATCGGCG CCTTGGTGGA GACGGACGCG
GTGGGGATGA AGGTCTTCGA CGCGCACGGT CTGACCCAGG TGATCGCGAC CAAGTCCAAC
GGCGTCAAGG ACGTCCTGCG GATCTGGACG AGGGCCGGTC ACGCGCTCGA CGTCACCGCC
GATCATCTGG TGTGGCGGAG CACCTCCGCG GGTGCCGGGG CCTTCGTCCC CGCCGGCGCG
CTGCGGGCCG GGGACACCCT CGAGTGGCAT CGCACCATCG CCCCGGGCGA GGGTGAGATC
ACTTCACGGG AGATCGCCGA GGCGGCGCTC GCGGGCCGGC TGCAGGCGGA CGGTTTTGTT
GGTCGGTACG CCGGTACGAA CGCCTCGCTG ACCATCGAGG CGATGACTGT GCCGACCCGG
CTGTATGATG CTCCGCTACC CGTTGTCGCG GCTTATCTGC GCAGCCTGTT CCAGGCCGAT
GGCTACGTGT CCCGCCGGGA GCGCTCGACG CTGATCGGGC TGGACATGAT CAGCGAGGGC
CTCATTCGCG GGGTGCAGGG TTTGCTCGCC CGGTTCGGCA TCTTCGCGCG GGTACGCCGC
GAGGCGGATC CGCGACCCGA CCGCCACGAC CTCTGGAGCC TGGGCATTCA GAACGCCGGT
GACCGGCGGA CGTTCGCGGA CGAGATCGGC TTCCTCGATC CGGTGAAGGC CGCGAAGCTG
GAGGCGTCGT TCGATCAGCC CGGCCAGGCC GCGAAGCCGG TGAAGCGGTT GCAGATCGAG
CGCATTGAGC CGCGCGGGCC GATGCCGGTC TACGACATCC AGACCGACAG CGGCGAGTAC
CTCTCCGCCG GCCTCCGTGT GCACAACTGC TTCATCCTCT CCGTGGACGA CACCATGGAG
TCGATCCTGA ACTGGTACCG GGAAGAGGGG CTGATCTTCA AGGGGGGTTC CGGGGCCGGG
CTCAACCTGT CCCGCATCCG GTCCTCGAAG GAGCTGCTGT CCTCCGGGGG CACCGCCTCC
GGGCCGGTGA GCTTCATGCG CGGCGCCGAC GCCTCGGCGG GTACGATCAA GTCCGGTGGC
GCGACCCGGC GGGCGGCGAA GATGGTCGTG CTCGACGTCG ATCATCCCGA CATCGTCGAG
TTCGTGGAGA CGAAGGCCCG GGAAGAAGAC AAGATCCGGG CGTTGCGGGA CGCCGGCTTC
GACATGGACC TCGGCGGGCG CGACATCGCC TCCGTGCAAT ACCAGAACGC CAACAACTCC
GTCCGGGTGA CCGACGAGTT CATGCGGGCG GTCGTCGACG GCGGCGGCTT CGACCTGCGG
GCCCGCCTCG ACGGCCGTGT CCTGGAGACG GTGGACGCCC GCGGGCTGTT CCACACGATC
GCCGAGGCCG CGTGGGCCTG CGCCGATCCC GGCATCCAGT ACGACGGAAC GATCAACGAC
TGGCACACCT GCCCCGAGAG CGGCCGGATC AGCGCCTCCA ACCCGTGCAG CGAGTACGTG
CACCTGGACA ACTCCAGCTG CAACCTGGCC TCGCTGAACC TGCTGAAGTT CCTGCGCCCG
GACCGCAGCT TCGACGCCGA GGCGTTCGTC GCGGCGGTCG AGTTGATCAT TACCGCGATG
GACATCTCGA TCTGCTTCGC CGACTTCCCG ACGCCGGAGA TCACCAGGGT CAGCCGGGCC
TACCGGCAGC TCGGCATCGG CTACGCCAAC CTCGGTGCCC TGCTGATGGC CAGCGCCCGG
GCCTACGACT CGGACGGCGG CCGGGCGCTG GCCGCATCGA TCACCTCGCT GATGACGGCC
ACCGCCTACC GGCGCTCCGC CGAACTCGCC GGGATCGTCG GCGCCTACGA CGGCTTCGCC
CGCAACGCGG ACGCGCACCG GCGGGTGATG CGCAAGCATG CCGCCGCGAA CGACGCGGTG
CGCAGCGTGC ACGCCGAGGA CTCCCGGATC CTCGCCGTCG CGTCCCGGGA ATGGGCCCGG
GCGCAGACCG TCGGCGAGAA GCACGGATGG CGCAACGCGC AGGCCAGCCT GCTCGCCCCG
ACGGGCACGA TCGGTCTGGC GATGGACTGC GACACCACCG GCATCGAGCC GGACCTCGCC
CTGGTGAAGA TGAAGAAGCT GGTCGGCGGC GCCAGCATGA GGATCGTGAA CCAGACGGTC
CCGGCGGCCC TGCAGGCGCT CGGCTACCCC GAGGAGACCA TCGAGGCGAT CGTCGAGTAC
ATCGCCGAGT ACGGGCACGT CATCGACGCT CCCGGCCTGC GTCCGGAGCA CTACGAGGTG
TTCGACTGCG CCATCGGGGA GCGCGCGATC TCCCCGATGG GCCATGTCCG CATGATGGCC
GCGGTACAGC CGTTCCTCTC CGGCGCGATC TCGAAGACGG TGAACATGCC GTCGACCGCC
ACGGTCGCCG AGGTCGAGCA GATCTACCTG GAGGGGTGGC GGCTGGGCCT GAAGGCCCTC
GCCATCTACC GGGACAACTG CAAGGTCGGC CAGCCGCTGA CCGACGTCAA GGGGGCGAAG
CAGGCCGCCG AGCTGGCCGC CACCCGGACC GGCACGGGAG TCGGGGTCGG CACGGGAGAC
GCGGTCGGGA CCGCCGGCTC CGTCGGACCC GCCCCGGTGG AGGTCGAGTA CCGACCGGTG
CGCCGCCGGC TGCCGAAGAC CCGCCCGTCG CGGACGGTGT CCTTCTCCGT CGGCGGGGCC
GAGGGTTATC TGACCGCCGG TTCCTACCCG GACGACGGTC TCGGTGAGGT CTTCATCAAG
ATGTCGAAGC AGGGGTCCAC CCTGGCGGGC GTGATGGACG CGTTCGCGAT CGCCATCTCG
ATCGGCCTGC AGTACGGCGT GCCGCTGGAG GCGTACGTCA GCAAGTTCAT CAACATGCGG
TTCGAGCCGG CTGGGATGAC CGACGACCCG GACGTGCGGA TCGCCCAGTC AATCATGGAT
TATCTGTTCC GTCGCCTCGC GCTCGACTAT CTCGACGCCG ATCAGCGGGC CGAACTCGGC
ATCTCGACCG CGGCCGACCG GGCCCGTCGG GTCGCGGGTC AGTACGGTCC AGCGCCGGCG
GTGGAGGCCG CGCGATCGGC GCAGCCCGCC GGGATCGACG GCCCGGCCGG ATCCCAGGGG
GCCGCGGTGA CCGGATCCTC GGCTTCCGTC GCCGATCGGG GTGACCCGGG CGTCCCGCCC
GGTCCGGCGG TAGGGAACGG CCCGGCGTAC GTGGCACGGG AGTTGCGGCT GGCACCGCCC
GGCGAGTCGC TCGTCGCGCA GACCGTGGTC GATGCTCCGC TCTGCTTCAC CTGCGGGGTG
ACCATGCGGC CAGCTGGTAG CTGCTACGTC TGTGAGCAGT GCGGTTCGAC CAGCGGCTGC
AGCTAG
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| Protein sequence | MTDSRGTKPS RSAAKASGLK IQRSRTTAGV HPYDEVTWES RDVVMTNWRD GSVNFEQRGV
EFPQFWSVNA SNIVTSKYFR GAPGTPGREW SLRQLIDRVV HAYGAAGREH GYFASDTDAE
IFEHELTWML LHQVFSFNSP VWFNVGTPAP QQVSACQPYD ALVSTPSGLV PIGALVETDA
VGMKVFDAHG LTQVIATKSN GVKDVLRIWT RAGHALDVTA DHLVWRSTSA GAGAFVPAGA
LRAGDTLEWH RTIAPGEGEI TSREIAEAAL AGRLQADGFV GRYAGTNASL TIEAMTVPTR
LYDAPLPVVA AYLRSLFQAD GYVSRRERST LIGLDMISEG LIRGVQGLLA RFGIFARVRR
EADPRPDRHD LWSLGIQNAG DRRTFADEIG FLDPVKAAKL EASFDQPGQA AKPVKRLQIE
RIEPRGPMPV YDIQTDSGEY LSAGLRVHNC FILSVDDTME SILNWYREEG LIFKGGSGAG
LNLSRIRSSK ELLSSGGTAS GPVSFMRGAD ASAGTIKSGG ATRRAAKMVV LDVDHPDIVE
FVETKAREED KIRALRDAGF DMDLGGRDIA SVQYQNANNS VRVTDEFMRA VVDGGGFDLR
ARLDGRVLET VDARGLFHTI AEAAWACADP GIQYDGTIND WHTCPESGRI SASNPCSEYV
HLDNSSCNLA SLNLLKFLRP DRSFDAEAFV AAVELIITAM DISICFADFP TPEITRVSRA
YRQLGIGYAN LGALLMASAR AYDSDGGRAL AASITSLMTA TAYRRSAELA GIVGAYDGFA
RNADAHRRVM RKHAAANDAV RSVHAEDSRI LAVASREWAR AQTVGEKHGW RNAQASLLAP
TGTIGLAMDC DTTGIEPDLA LVKMKKLVGG ASMRIVNQTV PAALQALGYP EETIEAIVEY
IAEYGHVIDA PGLRPEHYEV FDCAIGERAI SPMGHVRMMA AVQPFLSGAI SKTVNMPSTA
TVAEVEQIYL EGWRLGLKAL AIYRDNCKVG QPLTDVKGAK QAAELAATRT GTGVGVGTGD
AVGTAGSVGP APVEVEYRPV RRRLPKTRPS RTVSFSVGGA EGYLTAGSYP DDGLGEVFIK
MSKQGSTLAG VMDAFAIAIS IGLQYGVPLE AYVSKFINMR FEPAGMTDDP DVRIAQSIMD
YLFRRLALDY LDADQRAELG ISTAADRARR VAGQYGPAPA VEAARSAQPA GIDGPAGSQG
AAVTGSSASV ADRGDPGVPP GPAVGNGPAY VARELRLAPP GESLVAQTVV DAPLCFTCGV
TMRPAGSCYV CEQCGSTSGC S
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