| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3504 |
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| Symbol | |
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| ID | 3905238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4182891 |
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| End bp | 4185020 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880826 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_482586 |
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| Protein GI | 86742186 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.315612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGCAG ACCGAGTGAC ACCGGACCAT GCGGCGATGG AAGACGGGCG GCAGCCGGCC
GGCCGTGATG GTGGGTCGGT GGCTGCCGGC ACGCCACTGT GGGAACCGCC TCCCCGTCGG
ATCAGCCAGG CCGCGGTGAC CAACTACCGC GCCTGGCTCG CCGCCGAGCG GGGGGTTGAG
CTCGCCGACG ACACGCGCCT GTGGGAGTGG TCTGTCACCG ACCTGGACAC GTTCTGGGAG
TCGATCTGGG ATTTCTGCGC GGTCGAGGGG GACCGCGGCA CCGGTCCGGC GCTCGCCGAC
GCGGCGATGC CCGGCGCGGT CTGGTTTCCC GGTGCCCGGG TGAACTACGC GGAGAACGCG
CTCACCCGGC GCGGGCCGGC CCCGGCCGTC ATCGCCGTGC GCGAGGACGG TGCCACGGCC
GTGGTGTCCT GGGACGAGCT GCGCCGGCAG GTGGCGAAGG CGGCGGCGGG ACTGCGGAGC
CTGGGTGTCG CCGAGGGTGA CCGGGTCTGC GCCGTGCTGC CGAACACCGT CTACGCGATG
GTGGGGATGC TGGCCACCGC CAGCATCGGC GCGGTGTGGT CGTCGTGCTC GCCGGAGCTC
GGCCCGACGG CCCTGCGCGC GCGGTTCGGC CAGATCGACC CGAAGGTCCT GATCGGCGTT
GACGGCTACA GCTACGGCGG GAAGAGCTAC GACGCCCTCG ACACCCTCGC CGCGCTCGCG
GGCGACCTGC CGGGACTCGG GGCAAGCGTG ATCGTGCCGT ACCTGTGGCC GGACGCGCTC
TCCCGGGCCC GGGCCGCGGG GCTGCCGGGG CTGCTCACCT GGGACGAGCT GATGGCTTCG
GAGACCTCCG AGCCCGAGTT CACCCGGGTC GCCTTCGACG CGCCGCTGTG GATCCTCTAC
TCGTCCGGCA CGACCGGCCC CCCCAAGGCG ATCGTGCACG GCCACGGCGG TATCCTGCTG
GAGCATCTGA AGTCGCTGGC GTTGCACCTC GATCTCGGTC CGGACGACCG GTTCTGCTGG
TTCACCACGA CCGGCTGGAT GATGTGGAAC TATCTGGTCT CCGGTCTGCT CGTCGGCGCG
ACCGTCGTGC TCTACGACGG AGCGCCCGGC TATCCGGCGC TCGGCACCCT GTTCGGTCTG
GCGGAGGCCC TGGAGCTCAC GTGCCTGGGC ACGTCCGTGG GCTACCTGCA GGCCTGCGAG
GACGCCGGGC TGGTCCCGCG CGAGTTCGCC GATCTGTCCA GGCTGCGCAC CGTCGGATCG
ACCGGATCGC CACTGTCCGC AGCCGGCTAT GCCTGGGTGT ACGAAGCGGT GAGCCCGACC
GTGATGCTGT CGTCGATCAG CGGTGGCACC GACGTCTGCA CGGCGCTGGT GGCGGGCCTG
CCGACGATGC CGGTGCGGGC CGGGGAGATC GGATCACGCG CGCTGGGCTG CGCGGTGCGC
GTCTTCGACG AGGCCGGCGA GGAGGTCGTC GACGAGGTCG GTGAGCTTGT CGTGACCGCG
CCGATGCCGT CCATGCCGCT GTGCTTCTGG GCTGACCCGG ACGGCGGCCG GCTGCGGGAG
AGCTACTTCT CCGTCTACCC CGGCGTCTGG CGCCACGGGG ACTGGGCGAG GATCACACCT
ACCGGTGCCG TCGTCATCCA GGGACGTTCG GACGCGACGT TGAACCGCGG CGGCGTCCGG
ATCGGTACCA GCGAGCTCTA CAGCGTGGTC GAGCGGGTCC CCGGGATCGC CGACAGCCTC
GCGGTCGACA CCGCGGACGA GCGCGGGCAC GGCGAGCTGC TCCTTTTCGT CGTCCTCACC
GAGCCCGGCC TGACCGAGGC GGTGGCCGCT CGGCTGCGCG AGGTTCTGCG CGCCGAACTC
AGCCCACGCC ACGTTCCCGA CCGGATCATC GAGATCACCG AGGTCCCTCG GACCCACACC
GGCAAGAAGC TCGAGGTACC GGTGAAGCGC CTGCTCGCCG GGACCGCCCT GGACGAGGCC
GTGAGCCTCG ACTCGGTCGC CAACCCCGAT GCCCTGCTGC CCTTCGCCGC CGCCTCGGCC
CGGTCGCGGC GGTCGGCGTC GGAGCCGATG ACGGGAAGCG CACTGGAACC CGGCACCGGA
TCCGACGGAG AAGCCGAACC CGGAGCTTGA
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| Protein sequence | MAADRVTPDH AAMEDGRQPA GRDGGSVAAG TPLWEPPPRR ISQAAVTNYR AWLAAERGVE
LADDTRLWEW SVTDLDTFWE SIWDFCAVEG DRGTGPALAD AAMPGAVWFP GARVNYAENA
LTRRGPAPAV IAVREDGATA VVSWDELRRQ VAKAAAGLRS LGVAEGDRVC AVLPNTVYAM
VGMLATASIG AVWSSCSPEL GPTALRARFG QIDPKVLIGV DGYSYGGKSY DALDTLAALA
GDLPGLGASV IVPYLWPDAL SRARAAGLPG LLTWDELMAS ETSEPEFTRV AFDAPLWILY
SSGTTGPPKA IVHGHGGILL EHLKSLALHL DLGPDDRFCW FTTTGWMMWN YLVSGLLVGA
TVVLYDGAPG YPALGTLFGL AEALELTCLG TSVGYLQACE DAGLVPREFA DLSRLRTVGS
TGSPLSAAGY AWVYEAVSPT VMLSSISGGT DVCTALVAGL PTMPVRAGEI GSRALGCAVR
VFDEAGEEVV DEVGELVVTA PMPSMPLCFW ADPDGGRLRE SYFSVYPGVW RHGDWARITP
TGAVVIQGRS DATLNRGGVR IGTSELYSVV ERVPGIADSL AVDTADERGH GELLLFVVLT
EPGLTEAVAA RLREVLRAEL SPRHVPDRII EITEVPRTHT GKKLEVPVKR LLAGTALDEA
VSLDSVANPD ALLPFAAASA RSRRSASEPM TGSALEPGTG SDGEAEPGA
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