| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3499 |
|---|
| Symbol | |
|---|
| ID | 3905233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4172912 |
|---|
| End bp | 4173463 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637880821 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482581 |
|---|
| Protein GI | 86742181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.555316 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCC CTGATTCCGG CGCCGCCGGT ATGAGCCGAC CCACGGACGA GTACCCGCGC
ACGTGGGTGG TAGACGGTGC CAACGTGATT GGCTCCCGGC CCGACGGGTG GTGGCGGGAC
CGCCCAGGAG CGGCCGGACG GCTGGTCGAC GCTATTTCGG CGCGGATCAC CCGTCCCGGC
ACGCACCCGC GGCCATCATC GAGGCCGGAA TGGCCTGAGC GGATCGTGGT CGTTCTCGAG
GGTGCGGCAC GGGCCGGAGT TCCCGAGGGA ACCGTACGGC CCGGAAAGAT CACACCCGAA
AAGGTCCGGC CCGCGGACGT CGCGCCAGAG AAGGGCCGCC ACGTTCCAGC GAGGGCGGAC
CGCGCGGCAC CGACCATCGT CGTCGTGCAC GCCCCCGGGC ACGGCGACGA CGCCATCGTG
GCGGCGGCGC GCGACGCGGT CGCGCCCGTG GTCGTCATCA CCTCGGATCG GCAACTTGCC
GGCCGGCTGA GGTCGCTCGG CGCGGGTGTG CGACGGTCGG GATGGTTGTG GGAGCTGCTC
GACGAACGAT GA
|
|---|
| Protein sequence | MSTPDSGAAG MSRPTDEYPR TWVVDGANVI GSRPDGWWRD RPGAAGRLVD AISARITRPG
THPRPSSRPE WPERIVVVLE GAARAGVPEG TVRPGKITPE KVRPADVAPE KGRHVPARAD
RAAPTIVVVH APGHGDDAIV AAARDAVAPV VVITSDRQLA GRLRSLGAGV RRSGWLWELL
DER
|
|---|
| |