Gene Francci3_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3492 
Symbol 
ID3905226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4163389 
End bp4164225 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content71% 
IMG OID637880814 
Productpolyphosphate glucokinase 
Protein accessionYP_482574 
Protein GI86742174 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.323902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.544014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTCT TCGGGGTTGA CGTCGGCGGA AGCGGAATCA AGGGCGCTCC GGTCAACGTC 
GAGGACGGGT CGCTGGCCGC GCCCAGGTTC CGGCTGGCGA CTCCGCAGCC GGCCGAGCCC
ACCGCGGTGG CCGCGACCGT GGCGGAGGTG GTTGGCCGCT TCGGCTGGTC GGGACCGGTG
GGAGCCACCC TGCCCGCAGT GGTCAAGAAC GGGGTGGCGC TCACGGCGGC GAACATCGCC
CCGTCCTGGA TCGGCACCGA CGTGGTGTCC CTGTTCGCCG AGGCGCTGGG CGGGTCGGCC
GCCGCCACGG GCCCGGTGGA CATCACCGTG ATGAACGACG CGGACGCGGC GGGCATCGCC
GAGATGACCT TCGGCGCCGG ACGCGACACC ACCGGCCTGG TCGTCGTGAC GACGTTCGGA
ACCGGGATCG GTACCGCGCT GTTCCTCCAC GGCCAGCTCG TGCCCAACAC CGAACTCGGC
CACTTGGAGA TCTCCGGGCA CGACGCGGAG ACCAGGGCGT CCGATGCGGC CCGGGAACGC
GAGGGCCTCT CCTGGGAGAA GTGGGCCAAA CGGGTGACCA GGTACCTCAA CACCATCGAG
GCGCTGCTCT GGCCCGACCT CATCATCATC GGTGGTGGGG TGAGCAAGAG AGCGGACAAA
TACCTCGACC AGCTCGAGGT GCGTACCCGA GTGATCCCCG CGCAACTCCA GAACGAGGCA
GGCATCGTCG GCGCCGCCAT CTCCGGCCTG GTCGACCAGA ACCGGCCCCG ACCGGCTGCC
CGGCCCGCCC GCCGCCGAGG TCCCGCGACC CGCCCCCCGG GCGGCAGGCG ACCATAA
 
Protein sequence
MQVFGVDVGG SGIKGAPVNV EDGSLAAPRF RLATPQPAEP TAVAATVAEV VGRFGWSGPV 
GATLPAVVKN GVALTAANIA PSWIGTDVVS LFAEALGGSA AATGPVDITV MNDADAAGIA
EMTFGAGRDT TGLVVVTTFG TGIGTALFLH GQLVPNTELG HLEISGHDAE TRASDAARER
EGLSWEKWAK RVTRYLNTIE ALLWPDLIII GGGVSKRADK YLDQLEVRTR VIPAQLQNEA
GIVGAAISGL VDQNRPRPAA RPARRRGPAT RPPGGRRP